Difference between revisions of "Ec-05 002520"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPKIN-RXN DTDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14196 RXN-14196] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl-phosphate synthas...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPKIN-RXN DTDPKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14196 RXN-14196] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** nucleoside diphosphate kinase
+
** carbamoyl-phosphate synthase (glutamine-hydrolyzing)
−
** Nucleoside diphosphate kinase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/2.7.2 EC-2.7.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[TDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TTP]][c]
+
** 1 [[CARBAMATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dTDP[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 dTTP[c]
+
** 1 carbamate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 carbamoyl phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-26_003930]]
+
* Gene: [[Ec-10_006110]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-04_001140]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-11_004330]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-22_003280]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-11_005170]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-03_001380]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-07_000140]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
+
* [[PWY-7693]], guadinomine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7693 PWY-7693]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
−
** '''14''' reactions found over '''17''' reactions in the full pathway
+
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
Line 65: Line 29:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27682 27682]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30758 30758]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02093 R02093]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01395 R01395]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=nucleoside diphosphate kinase}}
+
{{#set: common name=carbamoyl-phosphate synthase (glutamine-hydrolyzing)}}
−
{{#set: common name=Nucleoside diphosphate kinase}}
+
{{#set: ec number=EC-2.7.2}}
−
{{#set: ec number=EC-2.7.4.6}}
+
{{#set: gene associated=Ec-10_006110}}
−
{{#set: gene associated=Ec-26_003930|Ec-04_001140|Ec-11_004330|Ec-22_003280|Ec-11_005170|Ec-03_001380|Ec-07_000140}}
+
{{#set: in pathway=PWY-7693}}
−
{{#set: in pathway=PWY-7210|PWY-7198|PWY-7184|PWY-7187|PWY-7197|PWY0-166|PWY-6545}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 14:29, 21 March 2018

Reaction RXN-14196

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carbamoyl-phosphate synthase (glutamine-hydrolyzing)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 carbamate[c] + 1 ATP[c] => 1 ADP[c] + 1 carbamoyl phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7693, guadinomine B biosynthesis: PWY-7693
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-05_002520&oldid=18965"