Difference between revisions of "Ec-16 003010"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-33084]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
* common name:
 +
** superpathway of fatty acid biosynthesis initiation (E. coli)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''5''' reactions found over '''8''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[3-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12482]][c]
+
* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
−
* With common name(s):
+
** 4 associated gene(s):
−
** 1 H2O[c] '''+''' 1 theobromine[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 3,7-dimethylurate[c]
+
*** [[Ec-27_002090]]
−
 
+
*** [[Ec-12_000650]]
−
== Genes associated with this reaction  ==
+
*** [[Ec-27_003480]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Ec-12_000640]]
−
* [[Ec-20_000230]]
+
** 2 reconstruction source(s) associated:
−
** [[pantograph]]-[[aragem]]
+
*** [[annotation-esiliculosus_genome]]
−
* [[Ec-20_000210]]
+
*** [[orthology-aragem]]
−
** [[pantograph]]-[[aragem]]
+
* [[ACP-S-ACETYLTRANSFER-RXN]]
−
== Pathways  ==
+
** 2 associated gene(s):
−
* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
+
*** [[Ec-12_000650]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
*** [[Ec-27_002090]]
−
== Reconstruction information  ==
+
** 1 reconstruction source(s) associated:
−
* Category: [[orthology]]
+
*** [[orthology-aragem]]
−
** Source: [[orthology-aragem]]
+
* [[PWY-4381]]
−
*** Tool: [[pantograph]]
+
** 0 associated gene:
 +
* [[PWY-5965]]
 +
** 0 associated gene:
 +
* [[PWY-5966]]
 +
** 0 associated gene:
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* ECOCYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07978 R07978]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-33084}}
−
{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
+
{{#set: taxonomic range=TAX-33208}}
−
{{#set: in pathway=PWY-6632}}
+
{{#set: taxonomic range=TAX-4751}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: common name=superpathway of fatty acid biosynthesis initiation (E. coli)}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reaction found=5}}
 +
{{#set: total reaction=8}}
 +
{{#set: completion rate=63.0}}

Revision as of 13:29, 21 March 2018

Pathway FASYN-INITIAL-PWY

Reaction(s) found

5 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_003010&oldid=18969"