Difference between revisions of "Ec-12 003110"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Ec-16_001970 == * left end position: ** 2189071 * transcription direction: ** POSITIVE * right end position: ** 2195158 * centisome position: ** 41.0...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] ==
+
== Gene Ec-16_001970 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2189071
 +
* transcription direction:
 +
** POSITIVE
 +
* right end position:
 +
** 2195158
 +
* centisome position:
 +
** 41.011856   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0047_0073
 +
** Esi0047_0073
 +
** phytol kinase
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[CDPDIGLYSYN-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[1-7-DIMETHYLXANTHINE]][c] '''=>''' 1 [[CPD-12483]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 paraxanthine[c] '''=>''' 1 1,7-dimethylurate[c] '''+''' 1 hydrogen peroxide[c]
+
* Reaction: [[RXN0-5515]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Ec-20_000230]]
+
* [[PWY-5667]]
−
** [[pantograph]]-[[aragem]]
+
* [[PWY0-1319]]
−
* [[Ec-20_000210]]
+
* [[PWY-5981]]
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways ==
+
−
* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=2189071}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07977 R07977]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=2195158}}
−
{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
+
{{#set: centisome position=41.011856    }}
−
{{#set: in pathway=PWY-6632}}
+
{{#set: common name=Esi_0047_0073|Esi0047_0073|phytol kinase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reaction associated=CDPDIGLYSYN-RXN|RXN0-5515}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: pathway associated=PWY-5667|PWY0-1319|PWY-5981}}
−
{{#set: reconstruction tool=pantograph}}
+

Revision as of 13:29, 21 March 2018

Gene Ec-16_001970

  • left end position:
    • 2189071
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2195158
  • centisome position:
    • 41.011856
  • Synonym(s):
    • Esi_0047_0073
    • Esi0047_0073
    • phytol kinase

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_003110&oldid=19047"