Difference between revisions of "PWY-4521"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-HYDRAT-RXN ENOYL-COA-HYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UNSPECIFIC-MONOOXYGENASE-RXN UNSPECIFIC-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-HYDRAT-RXN ENOYL-COA-HYDRAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UNSPECIFIC-MONOOXYGENASE-RXN UNSPECIFIC-MONOOXYGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ClpP/crotonase-like domain
+
** Cytochrome P450
−
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
+
** Aromatic-ring hydroxylase-like
−
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
+
** Monooxygenase, FAD-binding
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c] '''=>''' 1 [[L-3-HYDROXYACYL-COA]][c]
+
** 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[RH-Group]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Alcohols]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a trans-2-enoyl-CoA[c] '''=>''' 1 a (3S)-3-hydroxyacyl-CoA[c]
+
** 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''+''' 1 an organic molecule[c] '''=>''' 1 H2O[c] '''+''' 1 an alcohol[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-16_001250]]
+
* Gene: [[Ec-26_003280]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-06_001380]]
+
* Gene: [[Ec-14_006700]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-16_003560]]
+
* Gene: [[Ec-00_005820]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-14_006530]]
+
* Gene: [[Ec-00_005850]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-07_007260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-21_001590]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-20_004230]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_001320]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-01_010880]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-14_006690]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-24_002150]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-07_001680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-10_006240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-24_002140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5138]], unsaturated, even numbered fatty acid β-oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5138 PWY-5138]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16105 16105]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02685 R02685]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04122 R04122]
−
* PIR:
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T17476 T17476]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72706 S72706]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41006 S41006]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S06477 S06477]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40678 I40678]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I37195 I37195]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G69985 G69985]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70893 E70893]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70893 D70893]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D64890 D64890]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C71435 C71435]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69893 C69893]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69370 C69370]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69304 C69304]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
+
** [http://www.uniprot.org/uniprot/P04800 P04800]
−
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
+
** [http://www.uniprot.org/uniprot/Q06884 Q06884]
−
** [http://www.uniprot.org/uniprot/O29814 O29814]
+
** [http://www.uniprot.org/uniprot/P10632 P10632]
−
** [http://www.uniprot.org/uniprot/O29299 O29299]
+
** [http://www.uniprot.org/uniprot/P14779 P14779]
−
** [http://www.uniprot.org/uniprot/O34893 O34893]
+
** [http://www.uniprot.org/uniprot/O08336 O08336]
−
** [http://www.uniprot.org/uniprot/O23520 O23520]
+
** [http://www.uniprot.org/uniprot/Q7M0C2 Q7M0C2]
−
** [http://www.uniprot.org/uniprot/P76082 P76082]
+
** [http://www.uniprot.org/uniprot/P00185 P00185]
−
** [http://www.uniprot.org/uniprot/P64016 P64016]
+
** [http://www.uniprot.org/uniprot/P00176 P00176]
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
+
** [http://www.uniprot.org/uniprot/P49602 P49602]
−
** [http://www.uniprot.org/uniprot/O53419 O53419]
+
** [http://www.uniprot.org/uniprot/P43083 P43083]
−
** [http://www.uniprot.org/uniprot/P94549 P94549]
+
** [http://www.uniprot.org/uniprot/Q12573 Q12573]
−
** [http://www.uniprot.org/uniprot/Q13825 Q13825]
+
** [http://www.uniprot.org/uniprot/O04892 O04892]
−
** [http://www.uniprot.org/uniprot/P45361 P45361]
+
−
** [http://www.uniprot.org/uniprot/P28793 P28793]
+
−
** [http://www.uniprot.org/uniprot/P14604 P14604]
+
−
** [http://www.uniprot.org/uniprot/P22414 P22414]
+
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
+
−
** [http://www.uniprot.org/uniprot/P34559 P34559]
+
−
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
+
−
** [http://www.uniprot.org/uniprot/P55100 P55100]
+
−
** [http://www.uniprot.org/uniprot/P53526 P53526]
+
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
+
−
** [http://www.uniprot.org/uniprot/O52797 O52797]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ClpP/crotonase-like domain}}
+
{{#set: common name=Cytochrome P450}}
−
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
+
{{#set: common name=Aromatic-ring hydroxylase-like}}
−
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
+
{{#set: common name=Monooxygenase, FAD-binding}}
−
{{#set: ec number=EC-4.2.1.17}}
+
{{#set: ec number=EC-1.14.14.1}}
−
{{#set: gene associated=Ec-16_001250|Ec-06_001380|Ec-16_003560|Ec-14_006530}}
+
{{#set: gene associated=Ec-26_003280|Ec-14_006700|Ec-00_005820|Ec-00_005850|Ec-07_007260|Ec-21_001590|Ec-20_004230|Ec-00_001320|Ec-01_010880|Ec-14_006690|Ec-24_002150|Ec-07_001680|Ec-10_006240|Ec-24_002140}}
−
{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY-5138|PWY66-391}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:29, 21 March 2018

Reaction UNSPECIFIC-MONOOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cytochrome P450
    • Aromatic-ring hydroxylase-like
    • Monooxygenase, FAD-binding
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-4521&oldid=19072"