Difference between revisions of "RXN-15129"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Ec-01_005790 == * left end position: ** 5035560 * transcription direction: ** NEGATIVE * right end position: ** 5047106 * centisome position: ** 48.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116] ==
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== Gene Ec-01_005790 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5035560
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.88 EC-1.2.1.88]
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** NEGATIVE
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* right end position:
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** 5047106
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* centisome position:
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** 48.799698   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0392_0007
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** Esi0392_0007
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[LYSINE--TRNA-LIGASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[GLT]][c]
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* With common name(s):
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** 1 H2O[c] '''+''' 1 L-glutamate-5-semialdehyde[c] '''+''' 1 NAD+[c] '''=>''' 2 H+[c] '''+''' 1 NADH[c] '''+''' 1 L-glutamate[c]
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6853]], ethylene biosynthesis II (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5035560}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5047106}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]
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{{#set: centisome position=48.799698    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0392_0007|Esi0392_0007}}
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{{#set: ec number=EC-1.2.1.88}}
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{{#set: reaction associated=LYSINE--TRNA-LIGASE-RXN}}
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{{#set: in pathway=PROUT-PWY|ARGASEDEG-PWY|PWY-6853}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:31, 21 March 2018

Gene Ec-01_005790

  • left end position:
    • 5035560
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5047106
  • centisome position:
    • 48.799698
  • Synonym(s):
    • Esi_0392_0007
    • Esi0392_0007

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15129&oldid=19291"