Difference between revisions of "CPD-14894"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-tRNA ligase * ec...")
(Created page with "Category:Gene == Gene Ec-01_010740 == * left end position: ** 9055504 * transcription direction: ** POSITIVE * right end position: ** 9061356 * centisome position: ** 87.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] ==
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== Gene Ec-01_010740 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 9055504
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* common name:
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* transcription direction:
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** glutamate-tRNA ligase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.1.1.17 EC-6.1.1.17]
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** 9061356
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* centisome position:
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** 87.75704   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0008_0245
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** Esi0008_0245
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.3.16-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[GLT-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 ATP[c] '''+''' 1 a tRNAglu[c] '''+''' 1 H+[c] '''+''' 1 L-glutamate[c] '''=>''' 1 an L-glutamyl-[tRNAGlu][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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* Reaction: [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-06_008480]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=9055504}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23540 23540]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=9061356}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578]
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{{#set: centisome position=87.75704    }}
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* UNIPROT:
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{{#set: common name=Esi_0008_0245|Esi0008_0245}}
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** [http://www.uniprot.org/uniprot/P47700 P47700]
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{{#set: reaction associated=3.1.3.16-RXN|PROTEIN-TYROSINE-PHOSPHATASE-RXN}}
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** [http://www.uniprot.org/uniprot/O52914 O52914]
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** [http://www.uniprot.org/uniprot/P43818 P43818]
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** [http://www.uniprot.org/uniprot/O26157 O26157]
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** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1]
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** [http://www.uniprot.org/uniprot/O25360 O25360]
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** [http://www.uniprot.org/uniprot/O51345 O51345]
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** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3]
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** [http://www.uniprot.org/uniprot/P96551 P96551]
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** [http://www.uniprot.org/uniprot/O67271 O67271]
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** [http://www.uniprot.org/uniprot/O83679 O83679]
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** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7]
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** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78]
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** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7]
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** [http://www.uniprot.org/uniprot/O84451 O84451]
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** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8]
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** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4]
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** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3]
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** [http://www.uniprot.org/uniprot/Q9X172 Q9X172]
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** [http://www.uniprot.org/uniprot/Q58772 Q58772]
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** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8]
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** [http://www.uniprot.org/uniprot/P59690 P59690]
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** [http://www.uniprot.org/uniprot/Q43768 Q43768]
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** [http://www.uniprot.org/uniprot/Q43794 Q43794]
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** [http://www.uniprot.org/uniprot/P46655 P46655]
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** [http://www.uniprot.org/uniprot/P48525 P48525]
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** [http://www.uniprot.org/uniprot/P75114 P75114]
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** [http://www.uniprot.org/uniprot/Q49061 Q49061]
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** [http://www.uniprot.org/uniprot/P22249 P22249]
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** [http://www.uniprot.org/uniprot/P22250 P22250]
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** [http://www.uniprot.org/uniprot/P04805 P04805]
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** [http://www.uniprot.org/uniprot/P07814 P07814]
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** [http://www.uniprot.org/uniprot/P15189 P15189]
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** [http://www.uniprot.org/uniprot/O65253 O65253]
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** [http://www.uniprot.org/uniprot/O68055 O68055]
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** [http://www.uniprot.org/uniprot/O68142 O68142]
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** [http://www.uniprot.org/uniprot/O86528 O86528]
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** [http://www.uniprot.org/uniprot/O13775 O13775]
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** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3]
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** [http://www.uniprot.org/uniprot/O82462 O82462]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamate-tRNA ligase}}
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{{#set: ec number=EC-6.1.1.17}}
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{{#set: gene associated=Ec-06_008480}}
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{{#set: in pathway=TRNA-CHARGING-PWY|PWY-5188}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:32, 21 March 2018

Gene Ec-01_010740

  • left end position:
    • 9055504
  • transcription direction:
    • POSITIVE
  • right end position:
    • 9061356
  • centisome position:
    • 87.75704
  • Synonym(s):
    • Esi_0008_0245
    • Esi0008_0245

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-14894&oldid=19436"