Difference between revisions of "Ec-06 005300"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] == * direction: ** REVERSIBLE * common name: ** DNA topoisomerase ** DNA...")
(Created page with "Category:Gene == Gene Ec-13_002710 == * left end position: ** 4449101 * transcription direction: ** NEGATIVE * right end position: ** 4457850 * centisome position: ** 64.1...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] ==
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== Gene Ec-13_002710 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 4449101
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* common name:
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* transcription direction:
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** DNA topoisomerase
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** NEGATIVE
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** DNA topoisomerase type I
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* right end position:
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** Spo11/DNA topoisomerase VI subunit A
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** 4457850
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/5.99.1.2 EC-5.99.1.2]
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** 64.142586   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0357_0018
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** Esi0357_0018
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** GMPS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTAMIN-RXN]]
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** 1 [[Negatively-super-coiled-DNAs]][c] '''<=>''' 1 [[Relaxed-DNAs]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a negatively supercoiled DNA[c] '''<=>''' 1 a relaxed DNA[c]
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* Reaction: [[GMP-SYN-GLUT-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-12_007190]]
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* Reaction: [[GMP-SYN-NH3-RXN]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_011320]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-15_001600]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_011310]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-03_001530]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-03_004560]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-12_007130]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-08_003340]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-24_003570]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7221]]
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* [[GLUTAMINDEG-PWY]]
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* [[CITRULBIO-PWY]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=4449101}}
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** [http://www.uniprot.org/uniprot/Q7M0H8 Q7M0H8]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/Q07050 Q07050]
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{{#set: right end position=4457850}}
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** [http://www.uniprot.org/uniprot/Q9JWZ5 Q9JWZ5]
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{{#set: centisome position=64.142586    }}
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** [http://www.uniprot.org/uniprot/Q59046 Q59046]
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{{#set: common name=Esi_0357_0018|Esi0357_0018|GMPS}}
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** [http://www.uniprot.org/uniprot/Q9PLZ2 Q9PLZ2]
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{{#set: reaction associated=GLUTAMIN-RXN|GMP-SYN-GLUT-RXN|GMP-SYN-NH3-RXN}}
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** [http://www.uniprot.org/uniprot/P47368 P47368]
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{{#set: pathway associated=PWY-7221|GLUTAMINDEG-PWY|CITRULBIO-PWY}}
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** [http://www.uniprot.org/uniprot/Q9CG80 Q9CG80]
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** [http://www.uniprot.org/uniprot/P43704 P43704]
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** [http://www.uniprot.org/uniprot/P43012 P43012]
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** [http://www.uniprot.org/uniprot/P0A620 P0A620]
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** [http://www.uniprot.org/uniprot/P04786 P04786]
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** [http://www.uniprot.org/uniprot/P13099 P13099]
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** [http://www.uniprot.org/uniprot/P06612 P06612]
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** [http://www.uniprot.org/uniprot/P11387 P11387]
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** [http://www.uniprot.org/uniprot/P07799 P07799]
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** [http://www.uniprot.org/uniprot/P93119 P93119]
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** [http://www.uniprot.org/uniprot/O13463 O13463]
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** [http://www.uniprot.org/uniprot/Q94705 Q94705]
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** [http://www.uniprot.org/uniprot/Q04750 Q04750]
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** [http://www.uniprot.org/uniprot/P14294 P14294]
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** [http://www.uniprot.org/uniprot/P30181 P30181]
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** [http://www.uniprot.org/uniprot/P34185 P34185]
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** [http://www.uniprot.org/uniprot/P30189 P30189]
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** [http://www.uniprot.org/uniprot/P40114 P40114]
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** [http://www.uniprot.org/uniprot/P41511 P41511]
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** [http://www.uniprot.org/uniprot/Q8I3Z9 Q8I3Z9]
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** [http://www.uniprot.org/uniprot/Q26024 Q26024]
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** [http://www.uniprot.org/uniprot/Q27529 Q27529]
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** [http://www.uniprot.org/uniprot/P41512 P41512]
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** [http://www.uniprot.org/uniprot/O24307 O24307]
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** [http://www.uniprot.org/uniprot/P71196 P71196]
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** [http://www.uniprot.org/uniprot/O70157 O70157]
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** [http://www.uniprot.org/uniprot/O60126 O60126]
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** [http://www.uniprot.org/uniprot/O61660 O61660]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=DNA topoisomerase}}
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{{#set: common name=DNA topoisomerase type I}}
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{{#set: common name=Spo11/DNA topoisomerase VI subunit A}}
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{{#set: ec number=EC-5.99.1.2}}
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{{#set: gene associated=Ec-12_007190|Ec-01_011320|Ec-15_001600|Ec-01_011310|Ec-03_001530|Ec-03_004560|Ec-12_007130|Ec-08_003340|Ec-24_003570}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:33, 21 March 2018

Gene Ec-13_002710

  • left end position:
    • 4449101
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4457850
  • centisome position:
    • 64.142586
  • Synonym(s):
    • Esi_0357_0018
    • Esi0357_0018
    • GMPS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_005300&oldid=19559"