Difference between revisions of "CPD0-2015"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5965 PWY-5965] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5965 PWY-5965] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** fatty acid biosynthesis initiation III
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** nicotinate phosphoribosyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.4.21 EC-6.3.4.21]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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** 1 [[PRPP]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[NIACINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PPI]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-12_000650]]
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** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 ATP[c] '''+''' 1 nicotinate[c] '''+''' 1 H2O[c] '''=>''' 1 ADP[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 phosphate[c] '''+''' 1 diphosphate[c]
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*** [[Ec-27_003480]]
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*** [[Ec-27_002090]]
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== Genes associated with this reaction  ==
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*** [[Ec-12_000640]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-27_002350]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: GO-TERM
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== Reaction(s) not found ==
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-ACPDECARBOX-RXN MALONYL-ACPDECARBOX-RXN]
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== Pathways  ==
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* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
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** '''5''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5965 PWY-5965]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13393 13393]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=fatty acid biosynthesis initiation III}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01724 R01724]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=2}}
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** [http://www.uniprot.org/uniprot/P22253 P22253]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/P18133 P18133]
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** [http://www.uniprot.org/uniprot/P39683 P39683]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nicotinate phosphoribosyltransferase}}
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{{#set: ec number=EC-6.3.4.21}}
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{{#set: gene associated=Ec-27_002350}}
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{{#set: in pathway=PYRIDNUCSAL-PWY|PWY-5381}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:33, 21 March 2018

Reaction NICOTINATEPRIBOSYLTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nicotinate phosphoribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-phospho-α-D-ribose 1-diphosphate[c] + 1 ATP[c] + 1 nicotinate[c] + 1 H2O[c] => 1 ADP[c] + 1 β-nicotinate D-ribonucleotide[c] + 1 phosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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