Difference between revisions of "PWY-7426"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13717 CPD-13717] == * smiles: ** C([Se]CC(C([O-])=O)[N+])CC([N+])C(=O)[O-] * inchi key: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIOSEPISOMERIZATION-RXN TRIOSEPISOMERIZATION-RXN] == * direction: ** REVERSIBLE * common name: **...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13717 CPD-13717] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIOSEPISOMERIZATION-RXN TRIOSEPISOMERIZATION-RXN] ==
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* smiles:
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* direction:
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** C([Se]CC(C([O-])=O)[N+])CC([N+])C(=O)[O-]
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** REVERSIBLE
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* inchi key:
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** InChIKey=ZNWYDQPOUQRDLY-WHFBIAKZSA-N
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* common name:
 
* common name:
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** L-selenocystathionine
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** triose-phosphate isomerase
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* molecular weight:
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** Triosephosphate isomerase
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** 269.159   
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* ec number:
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** [http://enzyme.expasy.org/EC/5.3.1.1 EC-5.3.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-12729]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GAP]][c] '''<=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-15137]]
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** 1 D-glyceraldehyde 3-phosphate[c] '''<=>''' 1 glycerone phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-08_000500]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-24_000360]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-03_002790]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-23_004160]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
 +
== Pathways  ==
 +
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003]
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY66-373]], sucrose degradation V (sucrose &alpha;-glucosidase): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 +
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 +
** '''11''' reactions found over '''11''' reactions in the full pathway
 +
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=52921580 52921580]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18585 18585]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62226 62226]
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** [http://www.genome.jp/dbget-bin/www_bget?R01015 R01015]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C05699 C05699]
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** [http://www.uniprot.org/uniprot/P19118 P19118]
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* HMDB : HMDB06343
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** [http://www.uniprot.org/uniprot/P21820 P21820]
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{{#set: smiles=C([Se]CC(C([O-])=O)[N+])CC([N+])C(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/P48501 P48501]
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{{#set: inchi key=InChIKey=ZNWYDQPOUQRDLY-WHFBIAKZSA-N}}
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** [http://www.uniprot.org/uniprot/P62002 P62002]
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{{#set: common name=L-selenocystathionine}}
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** [http://www.uniprot.org/uniprot/O27120 O27120]
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{{#set: molecular weight=269.159    }}
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** [http://www.uniprot.org/uniprot/P27876 P27876]
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{{#set: consumed by=RXN-12729}}
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** [http://www.uniprot.org/uniprot/Q9PMQ6 Q9PMQ6]
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{{#set: reversible reaction associated=RXN-15137}}
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** [http://www.uniprot.org/uniprot/P19583 P19583]
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** [http://www.uniprot.org/uniprot/Q9UXX2 Q9UXX2]
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** [http://www.uniprot.org/uniprot/P47721 P47721]
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** [http://www.uniprot.org/uniprot/P47670 P47670]
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** [http://www.uniprot.org/uniprot/P50918 P50918]
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** [http://www.uniprot.org/uniprot/P43727 P43727]
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** [http://www.uniprot.org/uniprot/Q58923 Q58923]
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** [http://www.uniprot.org/uniprot/O28965 O28965]
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** [http://www.uniprot.org/uniprot/Q59182 Q59182]
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** [http://www.uniprot.org/uniprot/O59536 O59536]
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** [http://www.uniprot.org/uniprot/P36204 P36204]
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** [http://www.uniprot.org/uniprot/Q9JW31 Q9JW31]
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** [http://www.uniprot.org/uniprot/P04828 P04828]
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** [http://www.uniprot.org/uniprot/P00943 P00943]
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** [http://www.uniprot.org/uniprot/P00942 P00942]
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** [http://www.uniprot.org/uniprot/P00940 P00940]
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** [http://www.uniprot.org/uniprot/P60175 P60175]
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** [http://www.uniprot.org/uniprot/P0A858 P0A858]
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** [http://www.uniprot.org/uniprot/P60174 P60174]
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** [http://www.uniprot.org/uniprot/P00941 P00941]
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** [http://www.uniprot.org/uniprot/P15426 P15426]
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** [http://www.uniprot.org/uniprot/P17751 P17751]
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** [http://www.uniprot.org/uniprot/P00939 P00939]
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** [http://www.uniprot.org/uniprot/P12863 P12863]
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** [http://www.uniprot.org/uniprot/P07669 P07669]
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** [http://www.uniprot.org/uniprot/P35144 P35144]
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** [http://www.uniprot.org/uniprot/P48494 P48494]
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** [http://www.uniprot.org/uniprot/Q7M4X7 Q7M4X7]
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** [http://www.uniprot.org/uniprot/P29613 P29613]
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** [http://www.uniprot.org/uniprot/P30741 P30741]
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** [http://www.uniprot.org/uniprot/Q01893 Q01893]
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** [http://www.uniprot.org/uniprot/P48499 P48499]
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** [http://www.uniprot.org/uniprot/P48496 P48496]
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** [http://www.uniprot.org/uniprot/P46226 P46226]
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** [http://www.uniprot.org/uniprot/P46225 P46225]
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** [http://www.uniprot.org/uniprot/P48492 P48492]
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** [http://www.uniprot.org/uniprot/Q56738 Q56738]
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** [http://www.uniprot.org/uniprot/Q7LZE5 Q7LZE5]
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** [http://www.uniprot.org/uniprot/P46711 P46711]
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** [http://www.uniprot.org/uniprot/O32757 O32757]
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** [http://www.uniprot.org/uniprot/O74067 O74067]
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** [http://www.uniprot.org/uniprot/P48491 P48491]
 +
{{#set: direction=REVERSIBLE}}
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{{#set: common name=triose-phosphate isomerase}}
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{{#set: common name=Triosephosphate isomerase}}
 +
{{#set: ec number=EC-5.3.1.1}}
 +
{{#set: gene associated=Ec-08_000500|Ec-24_000360|Ec-03_002790|Ec-23_004160}}
 +
{{#set: in pathway=PWY-1042|P341-PWY|PWY-7003|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|P185-PWY|PWY66-399}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:34, 21 March 2018

Reaction TRIOSEPISOMERIZATION-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • triose-phosphate isomerase
    • Triosephosphate isomerase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1042, glycolysis IV (plant cytosol): PWY-1042
    • 8 reactions found over 10 reactions in the full pathway
  • P341-PWY, glycolysis V (Pyrococcus): P341-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7003, glycerol degradation to butanol: PWY-7003
    • 8 reactions found over 10 reactions in the full pathway
  • PWY66-373, sucrose degradation V (sucrose α-glucosidase): PWY66-373
    • 2 reactions found over 5 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 10 reactions found over 14 reactions in the full pathway
  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
    • 11 reactions found over 11 reactions in the full pathway
  • P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7426&oldid=19800"