Difference between revisions of "Ec-02 001230"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLXG oligosaccha...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNTRANSAM-RXN ACETYLORNTRANSAM-RXN] == * direction: ** REVERSIBLE * common name: ** Aminotra...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNTRANSAM-RXN ACETYLORNTRANSAM-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** xyloglucan XLXG oligosaccharide β-galactosidase
+
** Aminotransferase class-III
−
** Glycoside hydrolase-type carbohydrate-binding, subgroup
+
−
** Beta-galactosidase, family GH2
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
+
** [http://enzyme.expasy.org/EC/2.6.1.11 EC-2.6.1.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-13377]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
+
** 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[CPD-469]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 XLXG xyloglucan oligosaccharide[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
+
** 1 N-acetyl-L-ornithine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 N-acetyl-L-glutamate 5-semialdehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_001410]]
+
* Gene: [[Ec-14_006580]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-12_007000]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
+
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=xyloglucan XLXG oligosaccharide &beta;-galactosidase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18049 18049]
−
{{#set: common name=Glycoside hydrolase-type carbohydrate-binding, subgroup}}
+
* LIGAND-RXN:
−
{{#set: common name=Beta-galactosidase, family GH2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02283 R02283]
−
{{#set: ec number=EC-3.2.1.23}}
+
* UNIPROT:
−
{{#set: gene associated=Ec-06_001410|Ec-12_007000}}
+
** [http://www.uniprot.org/uniprot/P18335 P18335]
−
{{#set: in pathway=PWY-6807}}
+
** [http://www.uniprot.org/uniprot/Q9PIR7 Q9PIR7]
 +
** [http://www.uniprot.org/uniprot/Q9JTX9 Q9JTX9]
 +
** [http://www.uniprot.org/uniprot/Q9CHD3 Q9CHD3]
 +
** [http://www.uniprot.org/uniprot/P30900 P30900]
 +
** [http://www.uniprot.org/uniprot/P18544 P18544]
 +
** [http://www.uniprot.org/uniprot/O74548 O74548]
 +
** [http://www.uniprot.org/uniprot/O14433 O14433]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Aminotransferase class-III}}
 +
{{#set: ec number=EC-2.6.1.11}}
 +
{{#set: gene associated=Ec-14_006580}}
 +
{{#set: in pathway=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:35, 21 March 2018

Reaction ACETYLORNTRANSAM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Aminotransferase class-III
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline): PWY-5154
    • 7 reactions found over 9 reactions in the full pathway
  • GLUTORN-PWY, L-ornithine biosynthesis I: GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle): ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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