Difference between revisions of "Ec-20 003980"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
(Created page with "Category:Gene == Gene Ec-02_001230 == * left end position: ** 1551758 * transcription direction: ** POSITIVE * right end position: ** 1557507 * centisome position: ** 23.7...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] ==
+
== Gene Ec-02_001230 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 1551758
−
* common name:
+
* transcription direction:
−
** Beta-ketoacyl synthase, N-terminal
+
** POSITIVE
−
** beta-ketoacyl synthase, partial
+
* right end position:
−
** Thiolase-like, subgroup
+
** 1557507
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
* centisome position:
−
* ec number:
+
** 23.771563   
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** Pyridoxine kinase
 +
** Esi_0438_0007
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PNKIN-RXN]]
−
** 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Lignoceroyl-ACPs]][c] '''=>''' 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 a lignoceroyl-[acp][c] '''=>''' 1 a 3-oxo-cerotoyl-[acp][c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
+
** Source: [[orthology-aragem]]
−
 
+
* Reaction: [[PYRAMKIN-RXN]]
−
== Genes associated with this reaction  ==
+
** Source: [[annotation-esiliculosus_genome]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: ec-number
−
* [[Ec-12_000640]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
* Reaction: [[PYRIDOXKIN-RXN]]
−
***EC-NUMBER
+
−
* [[Ec-27_003480]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-12_000650]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-27_002090]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-6113]], superpathway of mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6113 PWY-6113]
+
−
** '''7''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
−
** '''30''' reactions found over '''182''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[PWY-7204]]
 +
* [[PWY-7282]]
 +
* [[PLPSAL-PWY]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=1551758}}
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
{{#set: right end position=1557507}}
−
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: centisome position=23.771563    }}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: common name=Pyridoxine kinase|Esi_0438_0007}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: reaction associated=PNKIN-RXN|PYRAMKIN-RXN|PYRIDOXKIN-RXN}}
−
{{#set: gene associated=Ec-12_000640|Ec-27_003480|Ec-12_000650|Ec-27_002090}}
+
{{#set: pathway associated=PWY-7204|PWY-7282|PLPSAL-PWY}}
−
{{#set: in pathway=PWY-6113|PWYG-321}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:35, 21 March 2018

Gene Ec-02_001230

  • left end position:
    • 1551758
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1557507
  • centisome position:
    • 23.771563
  • Synonym(s):
    • Pyridoxine kinase
    • Esi_0438_0007

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_003980&oldid=19951"