Difference between revisions of "RXN0-2142"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] == * direction: ** REVERSIBLE * common name: ** 5-methyltetrahydropt...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP CDP] == * smiles: ** C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O *...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP CDP] ==
−
* direction:
+
* smiles:
−
** REVERSIBLE
+
** C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O
 +
* inchi key:
 +
** InChIKey=ZWIADYZPOWUWEW-XVFCMESISA-K
 
* common name:
 
* common name:
−
** 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
+
** CDP
−
** Methionine synthase
+
* molecular weight:
−
* ec number:
+
** 400.155   
−
** [http://enzyme.expasy.org/EC/2.1.1.14 EC-2.1.1.14]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** cytidine-diphosphate
 +
** cytidine-5'-diphosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-12198]]
−
** 1 [[CPD-1302]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[MET]][c] '''+''' 1 [[CPD-1301]][c]
+
* [[CDPREDUCT-RXN]]
−
* With common name(s):
+
* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
−
** 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 L-methionine[c] '''+''' 1 tetrahydropteroyl tri-L-glutamate[c]
+
* [[CDPKIN-RXN]]
−
 
+
== Reaction(s) known to produce the compound ==
−
== Genes associated with this reaction  ==
+
* [[DOLICHOL-KINASE-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-12959]]
−
* [[Ec-28_003190]]
+
* [[RXN-12195]]
−
** ESILICULOSUS_GENOME
+
* [[RXN-11832]]
−
***EC-NUMBER
+
== Reaction(s) of unknown directionality ==
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-06_000970]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 63-38-7
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21196 21196]
+
* BIGG : 33901
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20056867 20056867]
−
* UNIPROT:
+
* HMDB : HMDB01546
−
** [http://www.uniprot.org/uniprot/P25665 P25665]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P45331 P45331]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00112 C00112]
−
** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/O26869 O26869]
+
** [http://www.chemspider.com/Chemical-Structure.16740259.html 16740259]
−
** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58069 58069]
−
** [http://www.uniprot.org/uniprot/P05694 P05694]
+
* METABOLIGHTS : MTBLC58069
−
** [http://www.uniprot.org/uniprot/Q42699 Q42699]
+
{{#set: smiles=C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O}}
−
** [http://www.uniprot.org/uniprot/Q39586 Q39586]
+
{{#set: inchi key=InChIKey=ZWIADYZPOWUWEW-XVFCMESISA-K}}
−
** [http://www.uniprot.org/uniprot/O48613 O48613]
+
{{#set: common name=CDP}}
−
** [http://www.uniprot.org/uniprot/P93263 P93263]
+
{{#set: molecular weight=400.155    }}
−
** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
+
{{#set: common name=cytidine-diphosphate|cytidine-5'-diphosphate}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: consumed by=RXN-12198|CDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|CDPKIN-RXN}}
−
{{#set: common name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase}}
+
{{#set: produced by=DOLICHOL-KINASE-RXN|RXN-12959|RXN-12195|RXN-11832}}
−
{{#set: common name=Methionine synthase}}
+
−
{{#set: ec number=EC-2.1.1.14}}
+
−
{{#set: gene associated=Ec-28_003190|Ec-06_000970}}
+
−
{{#set: in pathway=HOMOSER-METSYN-PWY|PWY-702|HSERMETANA-PWY|PWY-6151|PWY-5041}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:36, 21 March 2018

Metabolite CDP

  • smiles:
    • C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O
  • inchi key:
    • InChIKey=ZWIADYZPOWUWEW-XVFCMESISA-K
  • common name:
    • CDP
  • molecular weight:
    • 400.155
  • Synonym(s):
    • cytidine-diphosphate
    • cytidine-5'-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 63-38-7
  • BIGG : 33901
  • PUBCHEM:
  • HMDB : HMDB01546
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC58069
"C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-2142&oldid=20070"