Difference between revisions of "RXN0-5395"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXII-RXN GLYOXII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacylglutathione...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXII-RXN GLYOXII-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** oleate biosynthesis IV (anaerobic)
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** hydroxyacylglutathione hydrolase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.2.6 EC-3.1.2.6]
 
* Synonym(s):
 
* Synonym(s):
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** cis-7-hexadecenoate biosynthesis
 
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** cis-9-octadecenoate biosynthesis
 
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** (7Z)-hexadec-7-enoate biosynthesis
 
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** (9Z)-octadec-9-enoate biosynthesis
 
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** (7Z)-hexadecenoate biosynthesis
 
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** (9Z)-octadecenoate biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''10''' reactions found over '''14''' reactions in the full pathway
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* With identifiers:
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* [[RXN-16615]]
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** 1 [[WATER]][c] '''+''' 1 [[S-LACTOYL-GLUTATHIONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[D-LACTATE]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-27_002090]]
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** 1 H2O[c] '''+''' 1 (R)-S-lactoylglutathione[c] '''=>''' 1 H+[c] '''+''' 1 glutathione[c] '''+''' 1 (R)-lactate[c]
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*** [[Ec-12_000650]]
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*** [[Ec-27_003480]]
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== Genes associated with this reaction  ==
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*** [[Ec-12_000640]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-06_010680]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-16616]]
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*** Assignment: GO-TERM
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** 1 associated gene(s):
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* Gene: [[Ec-04_001020]]
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*** [[Ec-01_007100]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: GO-TERM
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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* [[RXN-16620]]
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* [[PWY-5386]], methylglyoxal degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5386 PWY-5386]
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** 1 associated gene(s):
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[Ec-27_002470]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-16621]]
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*** Tool: [[pathwaytools]]
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** 4 associated gene(s):
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*** [[Ec-27_003480]]
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*** [[Ec-12_000650]]
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−
*** [[Ec-12_000640]]
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*** [[Ec-27_002090]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16622]]
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−
** 1 associated gene(s):
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*** [[Ec-01_007100]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16624]]
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** 1 associated gene(s):
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*** [[Ec-27_002470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16625]]
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** 4 associated gene(s):
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*** [[Ec-12_000650]]
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*** [[Ec-27_003480]]
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*** [[Ec-27_002090]]
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*** [[Ec-12_000640]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16626]]
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** 1 associated gene(s):
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*** [[Ec-01_007100]]
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-16628]]
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** 1 associated gene(s):
+
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*** [[Ec-27_002470]]
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-9533]]
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−
** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16614 RXN-16614]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16619 RXN-16619]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16623 RXN-16623]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16627 RXN-16627]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=oleate biosynthesis IV (anaerobic)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25245 25245]
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{{#set: common name=cis-7-hexadecenoate biosynthesis|cis-9-octadecenoate biosynthesis|(7Z)-hexadec-7-enoate biosynthesis|(9Z)-octadec-9-enoate biosynthesis|(7Z)-hexadecenoate biosynthesis|(9Z)-octadecenoate biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=10}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01736 R01736]
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{{#set: total reaction=14}}
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* UNIPROT:
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{{#set: completion rate=71.0}}
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** [http://www.uniprot.org/uniprot/Q9UZT9 Q9UZT9]
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** [http://www.uniprot.org/uniprot/P0AC84 P0AC84]
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** [http://www.uniprot.org/uniprot/Q9JWC6 Q9JWC6]
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** [http://www.uniprot.org/uniprot/O35952 O35952]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=hydroxyacylglutathione hydrolase}}
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{{#set: ec number=EC-3.1.2.6}}
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{{#set: gene associated=Ec-06_010680|Ec-04_001020}}
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{{#set: in pathway=PWY-5386}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:37, 21 March 2018

Reaction GLYOXII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacylglutathione hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5386, methylglyoxal degradation I: PWY-5386
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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