Difference between revisions of "CPD-13937"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Acy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Acyl transferase/acyl hydrolase/lysophospholipase
 
−
** similar to lysophospholipase II
 
−
** Putative lysophospholipase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.5 EC-3.1.1.5]
+
** [http://enzyme.expasy.org/EC/2.1.1.17 EC-2.1.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-Lysophosphatidylcholines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Carboxylates]][c] '''+''' 1 [[L-1-GLYCERO-PHOSPHORYLCHOLINE]][c]
+
** 1 [[L-1-PHOSPHATIDYL-ETHANOLAMINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-405]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1-acyl-sn-glycero-3-phosphocholine[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 a carboxylate[c] '''+''' 1 sn-glycero-3-phosphocholine[c]
+
** 1 an L-1-phosphatidylethanolamine[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 a phosphatidyl-N-methylethanolamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-23_002490]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-04_000440]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-26_002630]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-12_006930]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-27_004350]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-24_003890]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6825]], phosphatidylcholine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6825 PWY-6825]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[gap-filling]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15177 15177]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11164 11164]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02746 R02746]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02056 R02056]
−
** [http://www.genome.jp/dbget-bin/www_bget?R07291 R07291]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O07427 O07427]
+
** [http://www.uniprot.org/uniprot/P05374 P05374]
−
** [http://www.uniprot.org/uniprot/Q7M3V3 Q7M3V3]
+
** [http://www.uniprot.org/uniprot/Q05197 Q05197]
−
** [http://www.uniprot.org/uniprot/P07000 P07000]
+
** [http://www.uniprot.org/uniprot/Q08388 Q08388]
−
** [http://www.uniprot.org/uniprot/P0ADA1 P0ADA1]
+
−
** [http://www.uniprot.org/uniprot/P39457 P39457]
+
−
** [http://www.uniprot.org/uniprot/Q03674 Q03674]
+
−
** [http://www.uniprot.org/uniprot/P53541 P53541]
+
−
** [http://www.uniprot.org/uniprot/P78854 P78854]
+
−
** [http://www.uniprot.org/uniprot/O42970 O42970]
+
−
** [http://www.uniprot.org/uniprot/Q9P327 Q9P327]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Acyl transferase/acyl hydrolase/lysophospholipase}}
+
{{#set: ec number=EC-2.1.1.17}}
−
{{#set: common name=similar to lysophospholipase II}}
+
{{#set: in pathway=PWY-6825}}
−
{{#set: common name=Putative lysophospholipase}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: ec number=EC-3.1.1.5}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: gene associated=Ec-23_002490|Ec-04_000440|Ec-26_002630|Ec-12_006930|Ec-27_004350|Ec-24_003890}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 14:37, 21 March 2018

Reaction 2.1.1.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-6825, phosphatidylcholine biosynthesis V: PWY-6825
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-13937&oldid=20214"