Difference between revisions of "Ec-03 003020"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN] == * direction: ** LEF...")
(Created page with "Category:Gene == Gene Ec-10_006100 == * left end position: ** 6189815 * transcription direction: ** NEGATIVE * right end position: ** 6196058 * centisome position: ** 95.2...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN] ==
+
== Gene Ec-10_006100 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 6189815
−
* common name:
+
* transcription direction:
−
** tRNA (cytosine-5-)-methyltransferase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.1.1.37 EC-2.1.1.37]
+
** 6196058
 +
* centisome position:
 +
** 95.21350   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0006_0181
 +
** Esi0006_0181
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.6.4.4-RXN]]
−
** 1 [[DNA-Cytosines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[5-Methylcytosine-DNA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
−
* With common name(s):
+
−
** 1 a cytosine in DNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 a DNA 5-methylcytosine[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-01_012190]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=6189815}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00380 R00380]
+
{{#set: transcription direction=NEGATIVE}}
−
* UNIPROT:
+
{{#set: right end position=6196058}}
−
** [http://www.uniprot.org/uniprot/P24581 P24581]
+
{{#set: centisome position=95.21350    }}
−
** [http://www.uniprot.org/uniprot/P05102 P05102]
+
{{#set: common name=Esi_0006_0181|Esi0006_0181}}
−
** [http://www.uniprot.org/uniprot/P05101 P05101]
+
{{#set: reaction associated=3.6.4.4-RXN}}
−
** [http://www.uniprot.org/uniprot/P06530 P06530]
+
−
** [http://www.uniprot.org/uniprot/O41165 O41165]
+
−
** [http://www.uniprot.org/uniprot/Q98580 Q98580]
+
−
** [http://www.uniprot.org/uniprot/Q98567 Q98567]
+
−
** [http://www.uniprot.org/uniprot/Q59606 Q59606]
+
−
** [http://www.uniprot.org/uniprot/P0A462 P0A462]
+
−
** [http://www.uniprot.org/uniprot/P71101 P71101]
+
−
** [http://www.uniprot.org/uniprot/P50192 P50192]
+
−
** [http://www.uniprot.org/uniprot/P50185 P50185]
+
−
** [http://www.uniprot.org/uniprot/Q38652 Q38652]
+
−
** [http://www.uniprot.org/uniprot/P52311 P52311]
+
−
** [http://www.uniprot.org/uniprot/P31974 P31974]
+
−
** [http://www.uniprot.org/uniprot/P30774 P30774]
+
−
** [http://www.uniprot.org/uniprot/P23941 P23941]
+
−
** [http://www.uniprot.org/uniprot/P25262 P25262]
+
−
** [http://www.uniprot.org/uniprot/P25267 P25267]
+
−
** [http://www.uniprot.org/uniprot/P25263 P25263]
+
−
** [http://www.uniprot.org/uniprot/P15446 P15446]
+
−
** [http://www.uniprot.org/uniprot/P24600 P24600]
+
−
** [http://www.uniprot.org/uniprot/P23737 P23737]
+
−
** [http://www.uniprot.org/uniprot/P13906 P13906]
+
−
** [http://www.uniprot.org/uniprot/P14243 P14243]
+
−
** [http://www.uniprot.org/uniprot/P14244 P14244]
+
−
** [http://www.uniprot.org/uniprot/P14230 P14230]
+
−
** [http://www.uniprot.org/uniprot/P11409 P11409]
+
−
** [http://www.uniprot.org/uniprot/P10283 P10283]
+
−
** [http://www.uniprot.org/uniprot/P25265 P25265]
+
−
** [http://www.uniprot.org/uniprot/P0AED9 P0AED9]
+
−
** [http://www.uniprot.org/uniprot/P20589 P20589]
+
−
** [http://www.uniprot.org/uniprot/Q02778 Q02778]
+
−
** [http://www.uniprot.org/uniprot/P95820 P95820]
+
−
** [http://www.uniprot.org/uniprot/P70750 P70750]
+
−
** [http://www.uniprot.org/uniprot/P25264 P25264]
+
−
** [http://www.uniprot.org/uniprot/Q47257 Q47257]
+
−
** [http://www.uniprot.org/uniprot/O87740 O87740]
+
−
** [http://www.uniprot.org/uniprot/P43420 P43420]
+
−
** [http://www.uniprot.org/uniprot/Q9JWD8 Q9JWD8]
+
−
** [http://www.uniprot.org/uniprot/Q9JU80 Q9JU80]
+
−
** [http://www.uniprot.org/uniprot/P08455 P08455]
+
−
** [http://www.uniprot.org/uniprot/P11408 P11408]
+
−
** [http://www.uniprot.org/uniprot/P17044 P17044]
+
−
** [http://www.uniprot.org/uniprot/P19888 P19888]
+
−
** [http://www.uniprot.org/uniprot/P00476 P00476]
+
−
** [http://www.uniprot.org/uniprot/P09915 P09915]
+
−
** [http://www.uniprot.org/uniprot/P68586 P68586]
+
−
** [http://www.uniprot.org/uniprot/Q9ZLZ0 Q9ZLZ0]
+
−
** [http://www.uniprot.org/uniprot/O24892 O24892]
+
−
** [http://www.uniprot.org/uniprot/P45000 P45000]
+
−
** [http://www.uniprot.org/uniprot/P29567 P29567]
+
−
** [http://www.uniprot.org/uniprot/P25282 P25282]
+
−
** [http://www.uniprot.org/uniprot/Q9JQR8 Q9JQR8]
+
−
** [http://www.uniprot.org/uniprot/O25746 O25746]
+
−
** [http://www.uniprot.org/uniprot/P36216 P36216]
+
−
** [http://www.uniprot.org/uniprot/P25283 P25283]
+
−
** [http://www.uniprot.org/uniprot/O23273 O23273]
+
−
** [http://www.uniprot.org/uniprot/Q92072 Q92072]
+
−
** [http://www.uniprot.org/uniprot/P79922 P79922]
+
−
** [http://www.uniprot.org/uniprot/O08431 O08431]
+
−
** [http://www.uniprot.org/uniprot/Q9Z330 Q9Z330]
+
−
** [http://www.uniprot.org/uniprot/P13864 P13864]
+
−
** [http://www.uniprot.org/uniprot/Q9S9I8 Q9S9I8]
+
−
** [http://www.uniprot.org/uniprot/P34881 P34881]
+
−
** [http://www.uniprot.org/uniprot/Q60171 Q60171]
+
−
** [http://www.uniprot.org/uniprot/O65343 O65343]
+
−
** [http://www.uniprot.org/uniprot/O49022 O49022]
+
−
** [http://www.uniprot.org/uniprot/Q9T0I1 Q9T0I1]
+
−
** [http://www.uniprot.org/uniprot/O49889 O49889]
+
−
** [http://www.uniprot.org/uniprot/O42731 O42731]
+
−
** [http://www.uniprot.org/uniprot/O48866 O48866]
+
−
** [http://www.uniprot.org/uniprot/O48867 O48867]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=tRNA (cytosine-5-)-methyltransferase}}
+
−
{{#set: ec number=EC-2.1.1.37}}
+
−
{{#set: gene associated=Ec-01_012190}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 14:37, 21 March 2018

Gene Ec-10_006100

  • left end position:
    • 6189815
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6196058
  • centisome position:
    • 95.21350
  • Synonym(s):
    • Esi_0006_0181
    • Esi0006_0181

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_003020&oldid=20239"