Difference between revisions of "Ec-01 002340"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OLEATE-CPD OLEATE-CPD] == * smiles: ** CCCCCCCCC=CCCCCCCCC([O-])=O * inchi key: ** InChIKey=ZQP...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMDECARB-RXN DIAMINOPIMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** PLP-b...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OLEATE-CPD OLEATE-CPD] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMDECARB-RXN DIAMINOPIMDECARB-RXN] ==
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* smiles:
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* direction:
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** CCCCCCCCC=CCCCCCCCC([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ZQPPMHVWECSIRJ-KTKRTIGZSA-M
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* common name:
 
* common name:
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** oleate
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** PLP-binding barrel
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* molecular weight:
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* ec number:
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** 281.457   
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** [http://enzyme.expasy.org/EC/4.1.1.20 EC-4.1.1.20]
 
* Synonym(s):
 
* Synonym(s):
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** oleic acid
 
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** (9Z)-octadec-9-enoate
 
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** (9Z)-octadecenoate
 
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** (9Z)-octadecenoic acid
 
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** (9Z)-octadec-9-enoic acid
 
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** (Z)-octadec-9-enoic acid
 
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** 18:1 n-9
 
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** 18:1Δ9cis
 
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** C18:1 n-9
 
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** cis-9-octadecenoic acid
 
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** cis-Δ9-octadecenoic acid
 
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** cis-oleic acid
 
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** octadec-9-enoic acid
 
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** octadecenoate (n-C18:1)
 
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** 9-octadecenoic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-9644]]
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* With identifiers:
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* [[RXN0-7239]]
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** 1 [[PROTON]][c] '''+''' 1 [[MESO-DIAMINOPIMELATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[LYS]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-15067]]
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** 1 H+[c] '''+''' 1 meso-diaminopimelate[c] '''=>''' 1 CO2[c] '''+''' 1 L-lysine[c]
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* [[RXN-15035]]
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* [[RXN-15068]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_000060]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-09_002360]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-09_002410]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-09_002420]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 112-80-1
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* RHEA:
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* BIGG : 1451011
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15101 15101]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460221 5460221]
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** [http://www.genome.jp/dbget-bin/www_bget?R00451 R00451]
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* HMDB : HMDB00207
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P19572 P19572]
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** [http://www.genome.jp/dbget-bin/www_bget?C00712 C00712]
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** [http://www.uniprot.org/uniprot/P0A5M4 P0A5M4]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P44316 P44316]
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** [http://www.chemspider.com/Chemical-Structure.4573837.html 4573837]
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** [http://www.uniprot.org/uniprot/P56129 P56129]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O67262 O67262]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=30823 30823]
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** [http://www.uniprot.org/uniprot/Q9JWA6 Q9JWA6]
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* METABOLIGHTS : MTBLC30823
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** [http://www.uniprot.org/uniprot/Q9CG26 Q9CG26]
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{{#set: smiles=CCCCCCCCC=CCCCCCCCC([O-])=O}}
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** [http://www.uniprot.org/uniprot/P00861 P00861]
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{{#set: inchi key=InChIKey=ZQPPMHVWECSIRJ-KTKRTIGZSA-M}}
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** [http://www.uniprot.org/uniprot/O27390 O27390]
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{{#set: common name=oleate}}
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** [http://www.uniprot.org/uniprot/Q9PII5 Q9PII5]
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{{#set: molecular weight=281.457    }}
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** [http://www.uniprot.org/uniprot/Q58497 Q58497]
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{{#set: common name=oleic acid|(9Z)-octadec-9-enoate|(9Z)-octadecenoate|(9Z)-octadecenoic acid|(9Z)-octadec-9-enoic acid|(Z)-octadec-9-enoic acid|18:1 n-9|18:1Δ9cis|C18:1 n-9|cis-9-octadecenoic acid|cis-Δ9-octadecenoic acid|cis-oleic acid|octadec-9-enoic acid|octadecenoate (n-C18:1)|9-octadecenoic acid}}
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** [http://www.uniprot.org/uniprot/O29458 O29458]
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{{#set: consumed by=RXN-9644|RXN0-7239}}
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** [http://www.uniprot.org/uniprot/P41023 P41023]
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{{#set: produced by=RXN-15067|RXN-15035|RXN-15068}}
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** [http://www.uniprot.org/uniprot/P23630 P23630]
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** [http://www.uniprot.org/uniprot/P09890 P09890]
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** [http://www.uniprot.org/uniprot/Q55484 Q55484]
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** [http://www.uniprot.org/uniprot/O05321 O05321]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=PLP-binding barrel}}
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{{#set: ec number=EC-4.1.1.20}}
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{{#set: gene associated=Ec-01_000060|Ec-09_002360|Ec-09_002410|Ec-09_002420}}
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{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:37, 21 March 2018

Reaction DIAMINOPIMDECARB-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • PLP-binding barrel
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5097, L-lysine biosynthesis VI: PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III: PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I: DAPLYSINESYN-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2941, L-lysine biosynthesis II: PWY-2941
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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