Difference between revisions of "CPD-4702"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin synthase * ec nu...")
(Created page with "Category:Gene == Gene Ec-14_005250 == * left end position: ** 4819202 * transcription direction: ** NEGATIVE * right end position: ** 4837545 * centisome position: ** 73.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] ==
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== Gene Ec-14_005250 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4819202
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* common name:
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* transcription direction:
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** biotin synthase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.8.1.6 EC-2.8.1.6]
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** 4837545
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* centisome position:
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** 73.45866   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0100_0092
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** Esi0100_0092
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CARBOXYPEPTIDASE-A-RXN]]
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** 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 2 [[CH33ADO]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[MET]][c]
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* With common name(s):
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** 2 S-adenosyl-L-methionine[c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 1 dethiobiotin[c] '''+''' 1 a sulfurated [sulfur carrier][c] '''=>''' 2 5'-deoxyadenosine[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 1 biotin[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 2 L-methionine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-24_000980]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4819202}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22060 22060]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4837545}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
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{{#set: centisome position=73.45866    }}
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* UNIPROT:
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{{#set: common name=Esi_0100_0092|Esi0100_0092}}
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** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
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{{#set: reaction associated=CARBOXYPEPTIDASE-A-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
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** [http://www.uniprot.org/uniprot/P53557 P53557]
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** [http://www.uniprot.org/uniprot/O67104 O67104]
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** [http://www.uniprot.org/uniprot/P44987 P44987]
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** [http://www.uniprot.org/uniprot/Q58692 Q58692]
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** [http://www.uniprot.org/uniprot/P0A506 P0A506]
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** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
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** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
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** [http://www.uniprot.org/uniprot/P46396 P46396]
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** [http://www.uniprot.org/uniprot/Q47862 Q47862]
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** [http://www.uniprot.org/uniprot/P19206 P19206]
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** [http://www.uniprot.org/uniprot/P32451 P32451]
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** [http://www.uniprot.org/uniprot/P54967 P54967]
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** [http://www.uniprot.org/uniprot/P46715 P46715]
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** [http://www.uniprot.org/uniprot/P73538 P73538]
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** [http://www.uniprot.org/uniprot/P12996 P12996]
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** [http://www.uniprot.org/uniprot/O59778 O59778]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=biotin synthase}}
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{{#set: ec number=EC-2.8.1.6}}
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{{#set: gene associated=Ec-24_000980}}
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{{#set: in pathway=PWY0-1507|PWY-7380}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:37, 21 March 2018

Gene Ec-14_005250

  • left end position:
    • 4819202
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4837545
  • centisome position:
    • 73.45866
  • Synonym(s):
    • Esi_0100_0092
    • Esi0100_0092

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-4702&oldid=20251"