Difference between revisions of "CYTIDINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16165 RXN-16165] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionyl-tRNA synthetase *...")
(Created page with "Category:Gene == Gene Ec-10_006200 == * left end position: ** 6269126 * transcription direction: ** NEGATIVE * right end position: ** 6274753 * centisome position: ** 96.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16165 RXN-16165] ==
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== Gene Ec-10_006200 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6269126
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* common name:
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* transcription direction:
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** Methionyl-tRNA synthetase
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** NEGATIVE
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** Nucleic acid-binding, OB-fold
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* right end position:
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* ec number:
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** 6274753
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** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10]
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* centisome position:
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** 96.43348   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0006_0195
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** Esi0006_0195
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** MDH4
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[MALATE-DEH-RXN]]
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** 1 [[MET]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Initiation-tRNAmet]][c] '''=>''' 1 [[L-methionyl-tRNAfmet]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* With common name(s):
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** 1 L-methionine[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 initiator tRNAmet[c] '''=>''' 1 an L-methionyl-[initiator tRNAmet][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-16_002540]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-18_004570]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-561]]
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* [[PWY-5913]]
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* [[PWY-1622]]
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* [[GLUCONEO-PWY]]
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* [[P42-PWY]]
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* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
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* [[PWY-5392]]
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* [[PWY-7383]]
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* [[PWY66-398]]
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* [[P23-PWY]]
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* [[PWY66-399]]
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* [[P105-PWY]]
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* [[GLYOXYLATE-BYPASS]]
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* [[FERMENTATION-PWY]]
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* [[PWY-6728]]
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* [[PWY-7115]]
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* [[P108-PWY]]
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* [[PWY-5690]]
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* [[PWY-6969]]
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* [[TCA]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=6269126}}
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{{#set: common name=Methionyl-tRNA synthetase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Nucleic acid-binding, OB-fold}}
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{{#set: right end position=6274753}}
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{{#set: ec number=EC-6.1.1.10}}
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{{#set: centisome position=96.43348    }}
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{{#set: gene associated=Ec-16_002540|Ec-18_004570}}
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{{#set: common name=Esi_0006_0195|Esi0006_0195|MDH4}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reaction associated=MALATE-DEH-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-561|PWY-5913|PWY-1622|GLUCONEO-PWY|P42-PWY|MALATE-ASPARTATE-SHUTTLE-PWY|PWY-5392|PWY-7383|PWY66-398|P23-PWY|PWY66-399|P105-PWY|GLYOXYLATE-BYPASS|FERMENTATION-PWY|PWY-6728|PWY-7115|P108-PWY|PWY-5690|PWY-6969|TCA}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:39, 21 March 2018

Gene Ec-10_006200

  • left end position:
    • 6269126
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6274753
  • centisome position:
    • 96.43348
  • Synonym(s):
    • Esi_0006_0195
    • Esi0006_0195
    • MDH4

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CYTIDINE&oldid=20514"