Difference between revisions of "RXN-10939"

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(Created page with "Category:Gene == Gene Ec-01_000690 == * left end position: ** 514187 * transcription direction: ** POSITIVE * right end position: ** 516306 * centisome position: ** 4.9829...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-01_000690 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] ==
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* left end position:
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* direction:
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** 514187
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 2-Isopropylmalate synthase
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* right end position:
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* ec number:
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** 516306
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** [http://enzyme.expasy.org/EC/2.3.3.13 EC-2.3.3.13]
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* centisome position:
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** 4.982995   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0228_0017
 
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** Esi0228_0017
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 3-methyl-2-oxobutanoate[c] '''+''' 1 acetyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (2S)-2-isopropylmalate[c] '''+''' 1 coenzyme A[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-28_002630]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-18_000460]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=514187}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21524 21524]
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{{#set: right end position=516306}}
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* LIGAND-RXN:
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{{#set: centisome position=4.982995    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213]
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{{#set: common name=Esi_0228_0017|Esi0228_0017}}
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* UNIPROT:
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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** [http://www.uniprot.org/uniprot/P06208 P06208]
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** [http://www.uniprot.org/uniprot/Q58595 Q58595]
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** [http://www.uniprot.org/uniprot/P09151 P09151]
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** [http://www.uniprot.org/uniprot/Q9PLV9 Q9PLV9]
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** [http://www.uniprot.org/uniprot/Q9JUK6 Q9JUK6]
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** [http://www.uniprot.org/uniprot/Q58787 Q58787]
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** [http://www.uniprot.org/uniprot/P94565 P94565]
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** [http://www.uniprot.org/uniprot/Q9JP75 Q9JP75]
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** [http://www.uniprot.org/uniprot/Q02141 Q02141]
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** [http://www.uniprot.org/uniprot/P48575 P48575]
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** [http://www.uniprot.org/uniprot/O86511 O86511]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-Isopropylmalate synthase}}
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{{#set: ec number=EC-2.3.3.13}}
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{{#set: gene associated=Ec-28_002630|Ec-18_000460}}
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{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:39, 21 March 2018

Reaction 2-ISOPROPYLMALATESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-Isopropylmalate synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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