Difference between revisions of "D-galactopyranose"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENDEHYD-RXN PHENDEHYD-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.or...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA helicase family protein...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENDEHYD-RXN PHENDEHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** RNA helicase family protein
 +
** Probable RNA helicase SDE3
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.39 EC-1.2.1.39]
+
** [http://enzyme.expasy.org/EC/3.6.4.13 EC-3.6.4.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[PHENYLACETALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 1 [[PHENYLACETATE]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[Wound-RNA]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Unwound-RNA]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 phenylacetaldehyde[c] '''+''' 1 H2O[c] '''<=>''' 2 H+[c] '''+''' 1 phenylacetate[c] '''+''' 1 NADH[c]
+
** 1 wound RNA[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 1 an unwound RNA[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_002420]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-07_001080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6534]], phenylethylamine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6534 PWY-6534]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[2PHENDEG-PWY]], phenylethylamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=2PHENDEG-PWY 2PHENDEG-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6941]], styrene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6941 PWY-6941]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21392 21392]
+
{{#set: common name=RNA helicase family protein}}
−
* LIGAND-RXN:
+
{{#set: common name=Probable RNA helicase SDE3}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02536 R02536]
+
{{#set: ec number=EC-3.6.4.13}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=Ec-12_002420|Ec-07_001080}}
−
{{#set: ec number=EC-1.2.1.39}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-6534|2PHENDEG-PWY|PWY-6941|ANAPHENOXI-PWY|PWY-6318}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:39, 21 March 2018

Reaction RXN-11109

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA helicase family protein
    • Probable RNA helicase SDE3
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 wound RNA[c] + 1 H2O[c] + 1 ATP[c] => 1 an unwound RNA[c] + 1 phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=D-galactopyranose&oldid=20539"