Difference between revisions of "3.1.27.1-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-19_001720 == * left end position: ** 1875352 * transcription direction: ** POSITIVE * right end position: ** 1877425 * centisome position: ** 31.4...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16165 RXN-16165] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionyl-tRNA synthetase *...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-19_001720 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16165 RXN-16165] ==
−
* left end position:
+
* direction:
−
** 1875352
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Methionyl-tRNA synthetase
−
* right end position:
+
** Nucleic acid-binding, OB-fold
−
** 1877425
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10]
−
** 31.409311   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0121_0084
 
−
** Esi0121_0084
 
−
** NUOI
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[NADH-DEHYDROG-A-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[MET]][c] '''+''' 1 [[Initiation-tRNAmet]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c]
−
***ec-number
+
* With common name(s):
−
== Pathways associated ==
+
** 1 L-methionine[c] '''+''' 1 initiator tRNAmet[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-methionyl-[initiator tRNAmet][c]
−
* [[PWY-4302]]
+
 
−
* [[PWY-3781]]
+
== Genes associated with this reaction  ==
−
* [[PWY-5083]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY0-1334]]
+
* Gene: [[Ec-16_002540]]
−
* [[PWY0-1335]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[PWY-6692]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-18_004570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=1875352}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=Methionyl-tRNA synthetase}}
−
{{#set: right end position=1877425}}
+
{{#set: common name=Nucleic acid-binding, OB-fold}}
−
{{#set: centisome position=31.409311    }}
+
{{#set: ec number=EC-6.1.1.10}}
−
{{#set: common name=Esi_0121_0084|Esi0121_0084|NUOI}}
+
{{#set: gene associated=Ec-16_002540|Ec-18_004570}}
−
{{#set: reaction associated=NADH-DEHYDROG-A-RXN}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
−
{{#set: pathway associated=PWY-4302|PWY-3781|PWY-5083|PWY0-1334|PWY0-1335|PWY-6692}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:39, 21 March 2018

Reaction RXN-16165

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Methionyl-tRNA synthetase
    • Nucleic acid-binding, OB-fold
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-methionine[c] + 1 initiator tRNAmet[c] + 1 H+[c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-methionyl-[initiator tRNAmet][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=3.1.27.1-RXN&oldid=20555"