Difference between revisions of "RNASE-III-PROCESSING-PRODUCT-MRNA"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12200 RXN-12200] == * direction: ** LEFT-TO-RIGHT * common name: ** Apyrase * ec number: ** [ht...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12200 RXN-12200] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Apyrase
+
** UDP-N-acetylmuramate dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
+
** [http://enzyme.expasy.org/EC/1.3.1.98 EC-1.3.1.98]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[WATER]][c] '''+''' 1 [[CTP]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CMP]][c] '''+''' 2 [[Pi]][c]
+
** 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[UDP-N-ACETYLMURAMATE]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 H2O[c] '''+''' 1 CTP[c] '''=>''' 2 H+[c] '''+''' 1 CMP[c] '''+''' 2 phosphate[c]
+
** 1 UDP-N-acetyl-α-D-glucosamine-enolpyruvate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 UDP-N-acetyl-α-D-muramate[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-02_001970]]
+
* Gene: [[Ec-16_002060]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-26_003750]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-03_000110]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-19_003080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-21_001860]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-03_000480]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-09_002930]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
+
* [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7177]], UTP and CTP dephosphorylation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7177 PWY-7177]
+
* [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12248 12248]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
 +
** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
 +
** [http://www.uniprot.org/uniprot/P44605 P44605]
 +
** [http://www.uniprot.org/uniprot/P08373 P08373]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Apyrase}}
+
{{#set: common name=UDP-N-acetylmuramate dehydrogenase}}
−
{{#set: ec number=EC-3.6.1.5}}
+
{{#set: ec number=EC-1.3.1.98}}
−
{{#set: gene associated=Ec-02_001970}}
+
{{#set: gene associated=Ec-16_002060|Ec-26_003750|Ec-03_000110|Ec-19_003080|Ec-21_001860|Ec-03_000480|Ec-09_002930}}
−
{{#set: in pathway=PWY-7185|PWY-7177}}
+
{{#set: in pathway=PWY-6386|PWY-6387}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:41, 21 March 2018

Reaction UDPNACETYLMURAMATEDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-N-acetylmuramate dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6386, UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): PWY-6386
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6387, UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): PWY-6387
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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