Difference between revisions of "Ec-07 005770"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate dehydrogenase/fum...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1162 CPD0-1162] == * smiles: ** CCCCCCCCC=CCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1162 CPD0-1162] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCCCCC=CCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
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* inchi key:
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** InChIKey=JVEFYXPCQBMMAA-ZMLWRGBOSA-J
 
* common name:
 
* common name:
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** Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
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** (2E,5Z)-tetradecenoyl-CoA
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** SDH1, succinate dehydrogenase subunit 1
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* molecular weight:
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** SDH3, succinate dehydrogenase subunit 3
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** 969.83   
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** SDH2, succinate dehydrogenase subunit 2
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** SDH4, succinate dehydrogenase subunit 4
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
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* Synonym(s):
 
* Synonym(s):
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** 2-trans,5-cis-tetradecenoyl-CoA
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** 14:2-Δ2,Δ5-CoA
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** 2-trans,5-cis-tetradecadienoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN0-5393]]
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** 1 [[SUC]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[FUM]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-14576]]
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** 1 succinate[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 fumarate[c]
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* [[RXN-17783]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_007310]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-27_006560]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-07_002870]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-11_000360]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-05_003640]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-21_003470]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244134 25244134]
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{{#set: common name=SDH1, succinate dehydrogenase subunit 1}}
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* CHEBI:
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{{#set: common name=SDH3, succinate dehydrogenase subunit 3}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=87701 87701]
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{{#set: common name=SDH2, succinate dehydrogenase subunit 2}}
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{{#set: smiles=CCCCCCCCC=CCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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{{#set: common name=SDH4, succinate dehydrogenase subunit 4}}
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{{#set: inchi key=InChIKey=JVEFYXPCQBMMAA-ZMLWRGBOSA-J}}
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{{#set: ec number=EC-1.3.5.1}}
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{{#set: common name=(2E,5Z)-tetradecenoyl-CoA}}
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{{#set: gene associated=Ec-07_007310|Ec-27_006560|Ec-07_002870|Ec-11_000360|Ec-05_003640|Ec-21_003470}}
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{{#set: molecular weight=969.83    }}
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{{#set: in pathway=PWY-7254|P105-PWY|PWY-6969}}
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{{#set: common name=2-trans,5-cis-tetradecenoyl-CoA|14:2-Δ2,Δ5-CoA|2-trans,5-cis-tetradecadienoyl-CoA}}
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{{#set: reconstruction category=annotation}}
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{{#set: consumed by=RXN0-5393}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: produced by=RXN-14576|RXN-17783}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:41, 21 March 2018

Metabolite CPD0-1162

  • smiles:
    • CCCCCCCCC=CCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
  • inchi key:
    • InChIKey=JVEFYXPCQBMMAA-ZMLWRGBOSA-J
  • common name:
    • (2E,5Z)-tetradecenoyl-CoA
  • molecular weight:
    • 969.83
  • Synonym(s):
    • 2-trans,5-cis-tetradecenoyl-CoA
    • 14:2-Δ2,Δ5-CoA
    • 2-trans,5-cis-tetradecadienoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCC=CCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O" cannot be used as a page name in this wiki.




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