Difference between revisions of "Ec-03 004720"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-05_003640 == * left end position: ** 5641883 * transcription direction: ** POSITIVE * right end position: ** 5647367 * centisome position: ** 61.9...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-05_003640 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] ==
−
* left end position:
+
* direction:
−
** 5641883
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** ClpP/crotonase-like domain
−
* right end position:
+
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
−
** 5647367
+
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
−
* centisome position:
+
* ec number:
−
** 61.974854   
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0043_0106
 
−
** Esi0043_0106
 
−
** NADB
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[L-ASPARTATE-OXID-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-17386]][c] '''=>''' 1 [[CPD-17387]][c]
−
***ec-number
+
* With common name(s):
−
* [[RXN-14971]]
+
** 1 H2O[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''=>''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]
−
** esiliculosus_genome
+
 
−
***automated-name-match
+
== Genes associated with this reaction  ==
−
* [[RXN-15378]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** esiliculosus_genome
+
* Gene: [[Ec-16_003560]]
−
***automated-name-match
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
+
*** Assignment: EC-NUMBER
−
** esiliculosus_genome
+
* Gene: [[Ec-14_006530]]
−
***automated-name-match
+
** Source: [[annotation-esiliculosus_genome]]
−
== Pathways associated ==
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[PWY-561]]
+
* Gene: [[Ec-06_001380]]
−
* [[PWY0-1353]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[PWY-3781]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-4302]]
+
* Gene: [[Ec-16_001250]]
−
* [[PWY-7342]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[PYRIDNUCSYN-PWY]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-7279]]
+
== Pathways  ==
−
* [[PWY-5316]]
+
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
−
* [[P105-PWY]]
+
** '''14''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-6969]]
+
== Reconstruction information  ==
−
* [[PWY-6728]]
+
* Category: [[annotation]]
−
* [[PWY0-1329]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[PWY-7254]]
+
*** Tool: [[pathwaytools]]
−
* [[PWY-5690]]
+
−
* [[PWY66-398]]
+
−
* [[TCA]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=5641883}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=ClpP/crotonase-like domain}}
−
{{#set: right end position=5647367}}
+
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
−
{{#set: centisome position=61.974854    }}
+
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
−
{{#set: common name=Esi_0043_0106|Esi0043_0106|NADB}}
+
{{#set: ec number=EC-4.2.1.17}}
−
{{#set: reaction associated=L-ASPARTATE-OXID-RXN|RXN-14971|RXN-15378|SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN}}
+
{{#set: gene associated=Ec-16_003560|Ec-14_006530|Ec-06_001380|Ec-16_001250}}
−
{{#set: pathway associated=PWY-561|PWY0-1353|PWY-3781|PWY-4302|PWY-7342|PYRIDNUCSYN-PWY|PWY-7279|PWY-5316|P105-PWY|PWY-6969|PWY-6728|PWY0-1329|PWY-7254|PWY-5690|PWY66-398|TCA}}
+
{{#set: in pathway=PWY-7606}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:42, 21 March 2018

Reaction RXN-16135

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] => 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_004720&oldid=20885"