Difference between revisions of "Ec-19 003080"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17105 RXN-17105] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16615 RXN-16615] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17105 RXN-17105] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16615 RXN-16615] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Beta-ketoacyl synthase, N-terminal
 +
** Thiolase-like, subgroup
 +
** beta-ketoacyl synthase, partial
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.19 EC-1.14.19]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[CPD-12646]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[CPD-14407]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[3Z-dodec-3-enoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[5Z-3-oxo-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 a ferrocytochrome b5[c] '''+''' 1 (11Z,14Z)-icosa-11,14-dienoyl-CoA[c] '''+''' 2 H+[c] '''+''' 1 oxygen[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 2 H2O[c] '''+''' 1 dihomo γ-linolenoyl-CoA[c]
+
** 1 H+[c] '''+''' 1 a (3Z)-dodec-3-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a (5Z)-3-oxo-tetradec-5-enoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-27_003480]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-27_002090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-12_000640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-12_000650]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
+
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''10''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[annotation]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pathwaytools]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.19}}
+
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
−
{{#set: in pathway=PWY-7725}}
+
{{#set: common name=Thiolase-like, subgroup}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: common name=beta-ketoacyl synthase, partial}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: ec number=EC-2.3.1.41}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: gene associated=Ec-27_003480|Ec-27_002090|Ec-12_000640|Ec-12_000650}}
 +
{{#set: in pathway=PWY-7664}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:47, 21 March 2018

Reaction RXN-16615

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Beta-ketoacyl synthase, N-terminal
    • Thiolase-like, subgroup
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




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