Difference between revisions of "CPD-563"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-17_004300 == * left end position: ** 4689367 * transcription direction: ** NEGATIVE * right end position: ** 4691574 * centisome position: ** 97.7...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phosphate-depende...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** esiliculosus_genome | + | ** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[CPD-15056]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 1 L-cystathionine[c] '''=>''' 1 H+[c] '''+''' 1 L-cysteine[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c] |
| − | * [[ | + | |
| − | * [[ | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| + | * Gene: [[Ec-12_003100]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}} |
| − | {{#set: | + | {{#set: gene associated=Ec-12_003100}} |
| − | {{#set: | + | {{#set: in pathway=HOMOCYSDEGR-PWY|PWY-801}} |
| − | {{#set: | + | {{#set: reconstruction category=annotation}} |
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 13:47, 21 March 2018
Contents
Reaction RXN-14048
- direction:
- LEFT-TO-RIGHT
- common name:
- Pyridoxal phosphate-dependent transferase, major region, subdomain 1
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-CYSTATHIONINE[c] => 1 PROTON[c] + 1 CYS[c] + 1 CPD-15056[c]
- With common name(s):
- 1 L-cystathionine[c] => 1 H+[c] + 1 L-cysteine[c] + 1 (2Z)-2-aminobut-2-enoate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-12_003100
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
Pathways
- HOMOCYSDEGR-PWY, L-cysteine biosynthesis III (from L-homocysteine): HOMOCYSDEGR-PWY
- 4 reactions found over 4 reactions in the full pathway
- PWY-801, L-homocysteine and L-cysteine interconversion: PWY-801
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- RHEA:
