Difference between revisions of "SERINE--TRNA-LIGASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADDALT-RXN ADDALT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosine/AMP deaminase d...")
(Created page with "Category:Gene == Gene Ec-26_002040 == * left end position: ** 2438633 * transcription direction: ** NEGATIVE * right end position: ** 2441473 * centisome position: ** 37.0...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADDALT-RXN ADDALT-RXN] ==
+
== Gene Ec-26_002040 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2438633
−
* common name:
+
* transcription direction:
−
** Adenosine/AMP deaminase domain
+
** NEGATIVE
−
** adenosine deaminase
+
* right end position:
−
* ec number:
+
** 2441473
−
** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
+
* centisome position:
 +
** 37.042446   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0077_0131
 +
** Esi0077_0131
 +
** CDPK
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PROTEIN-KINASE-RXN]]
−
** 1 [[DEOXYADENOSINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DEOXYINOSINE]][c]
+
−
* With common name(s):
+
−
** 1 2'-deoxyadenosine[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 ammonium[c] '''+''' 1 2'-deoxyinosine[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-00_010560]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-04_003130]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways  ==
+
−
* [[PWY-7179-1]], purine deoxyribonucleosides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7179-1 PWY-7179-1]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-7179]], purine deoxyribonucleosides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7179 PWY-7179]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=2438633}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28190 28190]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=2441473}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02556 R02556]
+
{{#set: centisome position=37.042446    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Esi_0077_0131|Esi0077_0131|CDPK}}
−
{{#set: common name=Adenosine/AMP deaminase domain}}
+
{{#set: reaction associated=PROTEIN-KINASE-RXN}}
−
{{#set: common name=adenosine deaminase}}
+
−
{{#set: ec number=EC-3.5.4.4}}
+
−
{{#set: gene associated=Ec-00_010560|Ec-04_003130}}
+
−
{{#set: in pathway=PWY-7179-1|PWY-7179}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 14:47, 21 March 2018

Gene Ec-26_002040

  • left end position:
    • 2438633
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2441473
  • centisome position:
    • 37.042446
  • Synonym(s):
    • Esi_0077_0131
    • Esi0077_0131
    • CDPK

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=SERINE--TRNA-LIGASE-RXN&oldid=21634"