Difference between revisions of "Ec-07 003070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-4157 RXN3O-4157] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] == * direction: ** REVERSIBLE * common name: ** Pseudouridine-5'-phosphate gly...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-4157 RXN3O-4157] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** Pseudouridine-5'-phosphate glycosidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.58 EC-2.6.1.58]
+
** [http://enzyme.expasy.org/EC/4.2.1.70 EC-4.2.1.70]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[TYR]][c] '''<=>''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
+
** 1 [[URACIL]][c] '''+''' 1 [[CPD-15317]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[PSEUDOURIDINE-5-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 pyruvate[c] '''+''' 1 L-tyrosine[c] '''<=>''' 1 4-hydroxyphenylpyruvate[c] '''+''' 1 L-alanine[c]
+
** 1 uracil[c] '''+''' 1 D-ribofuranose 5-phosphate[c] '''<=>''' 1 H2O[c] '''+''' 1 pseudouridine 5'-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-04_005090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
+
* [[PWY-6019]], pseudouridine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6019 PWY-6019]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[annotation]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pathwaytools]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18337 18337]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09254 R09254]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01055 R01055]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JWF1 Q9JWF1]
 +
** [http://www.uniprot.org/uniprot/Q9JTX5 Q9JTX5]
 +
** [http://www.uniprot.org/uniprot/Q9PPJ9 Q9PPJ9]
 +
** [http://www.uniprot.org/uniprot/Q9CGH0 Q9CGH0]
 +
** [http://www.uniprot.org/uniprot/Q9CI80 Q9CI80]
 +
** [http://www.uniprot.org/uniprot/Q9JX44 Q9JX44]
 +
** [http://www.uniprot.org/uniprot/Q9V1A5 Q9V1A5]
 +
** [http://www.uniprot.org/uniprot/Q9PP96 Q9PP96]
 +
** [http://www.uniprot.org/uniprot/Q9PN18 Q9PN18]
 +
** [http://www.uniprot.org/uniprot/Q9PJ89 Q9PJ89]
 +
** [http://www.uniprot.org/uniprot/Q9PNJ2 Q9PNJ2]
 +
** [http://www.uniprot.org/uniprot/Q9PLW9 Q9PLW9]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-2.6.1.58}}
+
{{#set: common name=Pseudouridine-5'-phosphate glycosidase}}
−
{{#set: in pathway=PWY3O-4108}}
+
{{#set: ec number=EC-4.2.1.70}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: gene associated=Ec-04_005090}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: in pathway=PWY-6019}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:47, 21 March 2018

Reaction RXN0-5398

  • direction:
    • REVERSIBLE
  • common name:
    • Pseudouridine-5'-phosphate glycosidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 uracil[c] + 1 D-ribofuranose 5-phosphate[c] <=> 1 H2O[c] + 1 pseudouridine 5'-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6019, pseudouridine degradation: PWY-6019
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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