Difference between revisions of "CPD-224"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-20_002470 == * left end position: ** 2496176 * transcription direction: ** POSITIVE * right end position: ** 2505985 * centisome position: ** 48.4...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec numb...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-20_002470 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] ==
−
* left end position:
+
* direction:
−
** 2496176
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** NAD(P)-binding domain
−
* right end position:
+
* ec number:
−
** 2505985
+
** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
−
* centisome position:
+
−
** 48.40908   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0403_0021
 
−
** Esi0403_0021
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ACID-PHOSPHATASE-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[CPD-474]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-590]][c]
−
***go-term
+
* With common name(s):
−
* [[RXN-5822]]
+
** 1 (+)-taxifolin[c] '''+''' 1 NADPH[c] '''+''' 2 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 (2R,3S,4S)-leucocyanidin[c]
−
** esiliculosus_genome
+
 
−
***go-term
+
== Genes associated with this reaction  ==
−
== Pathways associated ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY-6348]]
+
* Gene: [[Ec-12_005240]]
−
* [[PWY-5083]]
+
** Source: [[orthology-aragem]]
−
* [[NADPHOS-DEPHOS-PWY]]
+
* Gene: [[Ec-23_001220]]
−
* [[NAD-BIOSYNTHESIS-II]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-12_001350]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways ==
 +
* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2496176}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03636 R03636]
−
{{#set: right end position=2505985}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=48.40908    }}
+
{{#set: common name=NAD(P)-binding domain}}
−
{{#set: common name=Esi_0403_0021|Esi0403_0021}}
+
{{#set: ec number=EC-1.1.1.219}}
−
{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
+
{{#set: gene associated=Ec-12_005240|Ec-23_001220|Ec-12_001350}}
−
{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
+
{{#set: in pathway=PWY1F-823}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:48, 21 March 2018

Reaction RXN-600

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (+)-taxifolin[c] + 1 NADPH[c] + 2 H+[c] => 1 NADP+[c] + 1 (2R,3S,4S)-leucocyanidin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-823, leucopelargonidin and leucocyanidin biosynthesis: PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-224&oldid=21763"