Difference between revisions of "AGMATIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] == * direction: ** LEFT-TO-RIGHT * common name: ** Haem peroxidase, plant/fungal...")
(Created page with "Category:Gene == Gene Ec-27_004630 == * left end position: ** 4089266 * transcription direction: ** NEGATIVE * right end position: ** 4093212 * centisome position: ** 63.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] ==
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== Gene Ec-27_004630 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4089266
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* common name:
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* transcription direction:
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** Haem peroxidase, plant/fungal/bacterial
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** NEGATIVE
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** ascorbate peroxidase
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* right end position:
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** 4093212
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* centisome position:
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** 63.400387   
 
* Synonym(s):
 
* Synonym(s):
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** L-ascorbic acid peroxidase
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** Esi_0000_0340
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** L-ascorbic acid-specific peroxidase
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** Esi0000_0340
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** ascorbic acid peroxidase
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDROFOLATEREDUCT-RXN]]
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** 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[CPD-318]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 2 L-ascorbate[c] '''+''' 1 hydrogen peroxide[c] '''+''' 2 H+[c] '''=>''' 2 H2O[c] '''+''' 2 monodehydroascorbate radical[c]
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* Reaction: [[THYMIDYLATESYN-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-02_001740]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-02_001210]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-19_000230]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-2261]], ascorbate glutathione cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2261 PWY-2261]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7199]]
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* [[PWY-3841]]
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* [[1CMET2-PWY]]
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* [[PWY-7187]]
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* [[PWY0-166]]
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* [[PWY-7184]]
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* [[PWY-6614]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4089266}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30266 30266]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4093212}}
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** [http://www.genome.jp/dbget-bin/www_bget?R09540 R09540]
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{{#set: centisome position=63.400387    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00644 R00644]
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{{#set: common name=Esi_0000_0340|Esi0000_0340}}
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* UNIPROT:
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{{#set: reaction associated=DIHYDROFOLATEREDUCT-RXN|THYMIDYLATESYN-RXN}}
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** [http://www.uniprot.org/uniprot/P48534 P48534]
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7199|PWY-3841|1CMET2-PWY|PWY-7187|PWY0-166|PWY-7184|PWY-6614}}
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** [http://www.uniprot.org/uniprot/Q7M287 Q7M287]
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** [http://www.uniprot.org/uniprot/O49159 O49159]
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** [http://www.uniprot.org/uniprot/Q7M3G0 Q7M3G0]
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** [http://www.uniprot.org/uniprot/Q05431 Q05431]
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** [http://www.uniprot.org/uniprot/Q43824 Q43824]
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** [http://www.uniprot.org/uniprot/Q41772 Q41772]
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** [http://www.uniprot.org/uniprot/Q41371 Q41371]
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** [http://www.uniprot.org/uniprot/Q42661 Q42661]
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** [http://www.uniprot.org/uniprot/Q42564 Q42564]
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** [http://www.uniprot.org/uniprot/O46921 O46921]
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** [http://www.uniprot.org/uniprot/P93404 P93404]
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** [http://www.uniprot.org/uniprot/Q9FE01 Q9FE01]
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** [http://www.uniprot.org/uniprot/O65634 O65634]
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** [http://www.uniprot.org/uniprot/Q39843 Q39843]
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** [http://www.uniprot.org/uniprot/O49122 O49122]
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** [http://www.uniprot.org/uniprot/O49822 O49822]
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** [http://www.uniprot.org/uniprot/Q42459 Q42459]
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** [http://www.uniprot.org/uniprot/Q39780 Q39780]
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** [http://www.uniprot.org/uniprot/Q96399 Q96399]
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** [http://www.uniprot.org/uniprot/O81333 O81333]
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** [http://www.uniprot.org/uniprot/O81603 O81603]
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** [http://www.uniprot.org/uniprot/O81604 O81604]
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** [http://www.uniprot.org/uniprot/Q42909 Q42909]
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** [http://www.uniprot.org/uniprot/Q9STM9 Q9STM9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Haem peroxidase, plant/fungal/bacterial}}
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{{#set: common name=ascorbate peroxidase}}
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{{#set: common name=L-ascorbic acid peroxidase|L-ascorbic acid-specific peroxidase|ascorbic acid peroxidase}}
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{{#set: gene associated=Ec-02_001740|Ec-02_001210|Ec-19_000230}}
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{{#set: in pathway=PWY-2261}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:48, 21 March 2018

Gene Ec-27_004630

  • left end position:
    • 4089266
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4093212
  • centisome position:
    • 63.400387
  • Synonym(s):
    • Esi_0000_0340
    • Esi0000_0340

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=AGMATIN-RXN&oldid=21821"