Difference between revisions of "Ec-22 000030"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGMATIN-RXN AGMATIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** agmatinase, partial **...")
(Created page with "Category:Gene == Gene Ec-15_004950 == * left end position: ** 5303079 * transcription direction: ** POSITIVE * right end position: ** 5308267 * centisome position: ** 98.2...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGMATIN-RXN AGMATIN-RXN] ==
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== Gene Ec-15_004950 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5303079
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* common name:
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* transcription direction:
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** agmatinase, partial
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** POSITIVE
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** Ureohydrolase
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* right end position:
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* ec number:
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** 5308267
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** [http://enzyme.expasy.org/EC/3.5.3.11 EC-3.5.3.11]
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* centisome position:
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** 98.236946   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0156_0051
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** Esi0156_0051
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.7.10.1-RXN]]
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** 1 [[AGMATHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[PUTRESCINE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 agmatine[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 putrescine[c]
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* Reaction: [[PROTEIN-KINASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-17_004300]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-17_004310]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-22_003700]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-823]], L-arginine degradation III (arginine decarboxylase/agmatinase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-823 PWY0-823]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-40]], putrescine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-40 PWY-40]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5303079}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13929 13929]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5308267}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01157 R01157]
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{{#set: centisome position=98.236946    }}
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* UNIPROT:
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{{#set: common name=Esi_0156_0051|Esi0156_0051}}
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** [http://www.uniprot.org/uniprot/P60654 P60654]
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{{#set: reaction associated=2.7.10.1-RXN|PROTEIN-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P60653 P60653]
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** [http://www.uniprot.org/uniprot/P60651 P60651]
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** [http://www.uniprot.org/uniprot/Q57757 Q57757]
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** [http://www.uniprot.org/uniprot/P73270 P73270]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=agmatinase, partial}}
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{{#set: common name=Ureohydrolase}}
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{{#set: ec number=EC-3.5.3.11}}
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{{#set: gene associated=Ec-17_004300|Ec-17_004310|Ec-22_003700}}
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{{#set: in pathway=PWY-6305|PWY0-823|PWY-40}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:49, 21 March 2018

Gene Ec-15_004950

  • left end position:
    • 5303079
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5308267
  • centisome position:
    • 98.236946
  • Synonym(s):
    • Esi_0156_0051
    • Esi0156_0051

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-22_000030&oldid=21861"