Difference between revisions of "1-Alkyl-glycerol-3-phosphate"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DPG DPG] == * smiles: ** C(C(O)C(OP(=O)([O-])[O-])=O)OP(=O)([O-])[O-] * inchi key: ** InChIKey=...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] == * direction: ** LEF...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DPG DPG] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] ==
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* smiles:
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* direction:
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** C(C(O)C(OP(=O)([O-])[O-])=O)OP(=O)([O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=LJQLQCAXBUHEAZ-UWTATZPHSA-J
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* common name:
 
* common name:
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** 1,3-bisphospho-D-glycerate
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** NAD(P)-binding domain
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* molecular weight:
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* ec number:
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** 262.006   
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** [http://enzyme.expasy.org/EC/3.2.2.9 EC-3.2.2.9]
 
* Synonym(s):
 
* Synonym(s):
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** 3-phospho-D-glyceroyl-phosphate
 
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** 3-phosphoglyceroyl-P
 
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** P-glyceroyl-P
 
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** phosphoglyceroyl-P
 
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** 3-phosphoglyceroyl-phosphate
 
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** 3-P-glyceroyl-P
 
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** DPG
 
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** 13-DPG
 
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** glycerate 1,3-bisphosphate
 
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** 3-phosphonato-D-glyceroyl phosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[1.2.1.13-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-564]][c] '''+''' 1 [[ADENINE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[GAPOXNPHOSPHN-RXN]]
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** 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H2O[c] '''=>''' 1 S-ribosyl-L-homocysteine[c] '''+''' 1 adenine[c]
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* [[PHOSGLYPHOS-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-22_002610]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6153]], autoinducer AI-2 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6153 PWY-6153]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 1981-49-3
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* RHEA:
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* BIGG : 34342
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17805 17805]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878409 46878409]
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** [http://www.genome.jp/dbget-bin/www_bget?R00194 R00194]
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* HMDB : HMDB01270
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9JV64 Q9JV64]
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** [http://www.genome.jp/dbget-bin/www_bget?C00236 C00236]
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** [http://www.uniprot.org/uniprot/Q9PJ10 Q9PJ10]
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* CHEMSPIDER:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.chemspider.com/Chemical-Structure.19698372.html 19698372]
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{{#set: common name=NAD(P)-binding domain}}
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* CHEBI:
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{{#set: ec number=EC-3.2.2.9}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57604 57604]
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{{#set: gene associated=Ec-22_002610}}
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* METABOLIGHTS : MTBLC57604
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{{#set: in pathway=PWY-6154|PWY-6151|PWY-6153}}
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{{#set: smiles=C(C(O)C(OP(=O)([O-])[O-])=O)OP(=O)([O-])[O-]}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=LJQLQCAXBUHEAZ-UWTATZPHSA-J}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: common name=1,3-bisphospho-D-glycerate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=262.006    }}
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{{#set: common name=3-phospho-D-glyceroyl-phosphate|3-phosphoglyceroyl-P|P-glyceroyl-P|phosphoglyceroyl-P|3-phosphoglyceroyl-phosphate|3-P-glyceroyl-P|DPG|13-DPG|glycerate 1,3-bisphosphate|3-phosphonato-D-glyceroyl phosphate}}
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{{#set: consumed by=1.2.1.13-RXN}}
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{{#set: reversible reaction associated=GAPOXNPHOSPHN-RXN|PHOSGLYPHOS-RXN}}
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Revision as of 14:50, 21 March 2018

Reaction ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 S-adenosyl-L-homocysteine[c] + 1 H2O[c] => 1 S-ribosyl-L-homocysteine[c] + 1 adenine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6154, autoinducer AI-2 biosynthesis II (Vibrio): PWY-6154
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6151, S-adenosyl-L-methionine cycle I: PWY-6151
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6153, autoinducer AI-2 biosynthesis I: PWY-6153
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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