Difference between revisions of "Ec-01 001760"

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(Created page with "Category:Gene == Gene Ec-07_002870 == * left end position: ** 3080445 * transcription direction: ** POSITIVE * right end position: ** 3083396 * centisome position: ** 39.8...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10654 RXN-10654] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Ec-07_002870 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10654 RXN-10654] ==
* left end position:
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* direction:
** 3080445
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** Beta-ketoacyl synthase, N-terminal
* right end position:
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** Thiolase-like, subgroup
** 3083396
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** beta-ketoacyl synthase, partial
* centisome position:
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** 3-oxoacyl-[acyl-carrier-protein] synthase
** 39.88958   
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* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
** Esi_0261_0032
 
** Esi0261_0032
 
** SDH4
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[RXN-14971]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[PROTON]][c] '''+''' 1 [[Cis-Delta5-dodecenoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-cis-D7-tetradecenoyl-ACPs]][c]
***ec-number
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* With common name(s):
* [[RXN-15378]]
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** 1 H+[c] '''+''' 1 a (5Z)-dodec-5-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-cis-Δ7-tetradecenoyl-[acp][c]
** esiliculosus_genome
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***ec-number
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== Genes associated with this reaction  ==
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
** esiliculosus_genome
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* Gene: [[Ec-27_003480]]
***ec-number
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** Source: [[annotation-esiliculosus_genome]]
== Pathways associated ==
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*** Assignment: EC-NUMBER
* [[PWY-561]]
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* Gene: [[Ec-12_000640]]
* [[PWY0-1353]]
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** Source: [[annotation-esiliculosus_genome]]
* [[PWY-3781]]
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*** Assignment: EC-NUMBER
* [[PWY-4302]]
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* Gene: [[Ec-12_000650]]
* [[PWY-7279]]
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** Source: [[annotation-esiliculosus_genome]]
* [[P105-PWY]]
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*** Assignment: GO-TERM
* [[PWY-6969]]
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* Gene: [[Ec-27_002090]]
* [[PWY-6728]]
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** Source: [[annotation-esiliculosus_genome]]
* [[PWY0-1329]]
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*** Assignment: EC-NUMBER
* [[PWY-7254]]
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== Pathways  ==
* [[PWY-5690]]
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
* [[PWY66-398]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
* [[TCA]]
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== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=3080445}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
{{#set: right end position=3083396}}
+
{{#set: common name=Thiolase-like, subgroup}}
{{#set: centisome position=39.88958    }}
+
{{#set: common name=beta-ketoacyl synthase, partial}}
{{#set: common name=Esi_0261_0032|Esi0261_0032|SDH4}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
{{#set: reaction associated=RXN-14971|RXN-15378|SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN}}
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{{#set: ec number=EC-2.3.1.41}}
{{#set: pathway associated=PWY-561|PWY0-1353|PWY-3781|PWY-4302|PWY-7279|P105-PWY|PWY-6969|PWY-6728|PWY0-1329|PWY-7254|PWY-5690|PWY66-398|TCA}}
+
{{#set: gene associated=Ec-27_003480|Ec-12_000640|Ec-12_000650|Ec-27_002090}}
 +
{{#set: in pathway=PWY-6282}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:50, 21 March 2018

Reaction RXN-10654

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Beta-ketoacyl synthase, N-terminal
    • Thiolase-like, subgroup
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): PWY-6282
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.