Difference between revisions of "RXN-14205"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN BIOTIN] == * smiles: ** C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12)) * inchi key: ** InChIK...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN BIOTIN] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12))
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* inchi key:
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** InChIKey=YBJHBAHKTGYVGT-ZKWXMUAHSA-M
 
* common name:
 
* common name:
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** Beta-ketoacyl synthase, N-terminal
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** biotin
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** Thiolase-like, subgroup
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* molecular weight:
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** beta-ketoacyl synthase, partial
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** 243.3  
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** vitamin H
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** coenzyme R
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** d-biotin
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[6.3.4.10-RXN]]
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** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c]
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* [[6.3.4.9-RXN]]
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* With common name(s):
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* [[BIOTINLIG-RXN]]
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** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a (3Z)-dec-3-enoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c]
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* [[6.3.4.11-RXN]]
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* [[TransportSeed_BIOTIN]]
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== Genes associated with this reaction  ==
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* [[RXN0-7192]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) known to produce the compound ==
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* [[Ec-12_000640]]
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* [[2.8.1.6-RXN]]
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** ESILICULOSUS_GENOME
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* [[TransportSeed_BIOTIN]]
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***EC-NUMBER
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== Reaction(s) of unknown directionality ==
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* [[Ec-27_003480]]
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* [[ExchangeSeed_BIOTIN]]
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** ESILICULOSUS_GENOME
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* [[RXN-17473]]
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***EC-NUMBER
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* [[Ec-27_002090]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-12_000650]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 58-85-5
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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* BIGG : 33931
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{{#set: common name=Thiolase-like, subgroup}}
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* PUBCHEM:
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{{#set: common name=beta-ketoacyl synthase, partial}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6560210 6560210]
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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* HMDB : HMDB00030
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{{#set: ec number=EC-2.3.1.41}}
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* LIGAND-CPD:
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{{#set: gene associated=Ec-12_000640|Ec-27_003480|Ec-27_002090|Ec-12_000650}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00120 C00120]
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{{#set: in pathway=PWY0-862}}
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* CHEMSPIDER:
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{{#set: reconstruction category=annotation}}
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** [http://www.chemspider.com/Chemical-Structure.5028036.html 5028036]
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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* CHEBI:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57586 57586]
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* METABOLIGHTS : MTBLC57586
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{{#set: smiles=C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12))}}
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{{#set: inchi key=InChIKey=YBJHBAHKTGYVGT-ZKWXMUAHSA-M}}
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{{#set: common name=biotin}}
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{{#set: molecular weight=243.3    }}
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{{#set: common name=vitamin H|coenzyme R|d-biotin}}
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{{#set: consumed by=6.3.4.10-RXN|6.3.4.9-RXN|BIOTINLIG-RXN|6.3.4.11-RXN|TransportSeed_BIOTIN|RXN0-7192}}
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{{#set: produced by=2.8.1.6-RXN|TransportSeed_BIOTIN}}
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{{#set: reversible reaction associated=ExchangeSeed_BIOTIN|RXN-17473}}

Revision as of 14:50, 21 March 2018

Metabolite BIOTIN

  • smiles:
    • C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12))
  • inchi key:
    • InChIKey=YBJHBAHKTGYVGT-ZKWXMUAHSA-M
  • common name:
    • biotin
  • molecular weight:
    • 243.3
  • Synonym(s):
    • vitamin H
    • coenzyme R
    • d-biotin

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 58-85-5
  • BIGG : 33931
  • PUBCHEM:
  • HMDB : HMDB00030
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57586
"C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12))" cannot be used as a page name in this wiki.




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