Difference between revisions of "Ec-15 000750"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine liga...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE] == * smiles: *...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(O)C2(=NC1(C(=O)NC(N)=NC=1NC2))
 +
* inchi key:
 +
** InChIKey=CQQNNQTXUGLUEV-UHFFFAOYSA-N
 
* common name:
 
* common name:
−
** tubulin-tyrosine ligase
+
** 6-(hydroxymethyl)-7,8-dihydropterin
−
** Tubulin-tyrosine ligase/Tubulin polyglutamylase
+
* molecular weight:
−
* ec number:
+
** 195.18   
−
** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4(3H)-one
 +
** 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-one
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
−
** 1 [[TYR]][c] '''+''' 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[Alpha-tubulins]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 L-tyrosine[c] '''+''' 1 detyrosinated α-tubulin[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 α-tubulin[c]
+
* [[H2NEOPTERINALDOL-RXN]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-26_006110]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-01_007560]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-05_000280]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-07_003840]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-19_002060]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-03_004300]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-19_003290]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-00_005910]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-18_002200]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-19_000160]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-02_006230]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-18_003990]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-06_008800]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-02_000600]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-14_002580]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-02_002820]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-02_000590]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-20_004590]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-01_004520]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* DRUGBANK : DB02119
−
** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
+
* PUBCHEM:
−
* UNIPROT:
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=218 218]
−
** [http://www.uniprot.org/uniprot/P38160 P38160]
+
* LIGAND-CPD:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C01300 C01300]
−
{{#set: common name=tubulin-tyrosine ligase}}
+
* CHEMSPIDER:
−
{{#set: common name=Tubulin-tyrosine ligase/Tubulin polyglutamylase}}
+
** [http://www.chemspider.com/Chemical-Structure.213.html 213]
−
{{#set: ec number=EC-6.3.2.25}}
+
* CHEBI:
−
{{#set: gene associated=Ec-26_006110|Ec-01_007560|Ec-05_000280|Ec-07_003840|Ec-19_002060|Ec-03_004300|Ec-19_003290|Ec-00_005910|Ec-18_002200|Ec-19_000160|Ec-02_006230|Ec-18_003990|Ec-06_008800|Ec-02_000600|Ec-14_002580|Ec-02_002820|Ec-02_000590|Ec-20_004590|Ec-01_004520}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=44841 44841]
−
{{#set: in pathway=}}
+
* BIGG : 1447073
−
{{#set: reconstruction category=annotation}}
+
{{#set: smiles=C(O)C2(=NC1(C(=O)NC(N)=NC=1NC2))}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: inchi key=InChIKey=CQQNNQTXUGLUEV-UHFFFAOYSA-N}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: common name=6-(hydroxymethyl)-7,8-dihydropterin}}
 +
{{#set: molecular weight=195.18    }}
 +
{{#set: common name=2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4(3H)-one|2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-one}}
 +
{{#set: consumed by=H2PTERIDINEPYROPHOSPHOKIN-RXN}}
 +
{{#set: reversible reaction associated=H2NEOPTERINALDOL-RXN}}

Revision as of 14:51, 21 March 2018

Metabolite AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE

  • smiles:
    • C(O)C2(=NC1(C(=O)NC(N)=NC=1NC2))
  • inchi key:
    • InChIKey=CQQNNQTXUGLUEV-UHFFFAOYSA-N
  • common name:
    • 6-(hydroxymethyl)-7,8-dihydropterin
  • molecular weight:
    • 195.18
  • Synonym(s):
    • 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4(3H)-one
    • 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-one

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • DRUGBANK : DB02119
  • PUBCHEM:
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : 1447073




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-15_000750&oldid=22250"