Difference between revisions of "QUINATE"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11444 CPD-11444] == * smiles: ** C(=O)([O-])CCC5(=C4(NC(CC1(NC(=C(CC([O-])=O)C(CCC(=O)[O-])...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine liga...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11444 CPD-11444] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
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* smiles:
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* direction:
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** C(=O)([O-])CCC5(=C4(NC(CC1(NC(=C(CC([O-])=O)C(CCC(=O)[O-])=1)CC2(NC(=C(C(CCC(=O)[O-])=2)CC(=O)[O-])CC3(=C(CCC([O-])=O)C(CC(=O)[O-])=C(N3)C4))))=C(CC(=O)[O-])5))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=QTTNOSKSLATGQB-UHFFFAOYSA-F
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* common name:
 
* common name:
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** uroporphyrinogen-I
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** tubulin-tyrosine ligase
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* molecular weight:
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** Tubulin-tyrosine ligase/Tubulin polyglutamylase
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** 828.742   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
 
* Synonym(s):
 
* Synonym(s):
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** uroporphyrinogen I
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-14396]]
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** 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Detyrosinated-alpha--tubulins]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-10642]]
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** 1 L-tyrosine[c] '''+''' 1 ATP[c] '''+''' 1 detyrosinated α-tubulin[c] '''=>''' 1 ADP[c] '''+''' 1 α-tubulin[c] '''+''' 1 phosphate[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-05_000280]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-19_002060]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-19_003290]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_000600]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-26_006110]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-18_002200]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_004300]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-02_000590]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_006230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-00_005910]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-20_004590]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-07_003840]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_002820]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-19_000160]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-14_002580]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_008800]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_007560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_004520]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-18_003990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25201940 25201940]
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** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
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* CHEMSPIDER:
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* UNIPROT:
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** [http://www.chemspider.com/Chemical-Structure.389644.html 389644]
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** [http://www.uniprot.org/uniprot/P38160 P38160]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62626 62626]
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{{#set: common name=tubulin-tyrosine ligase}}
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* LIGAND-CPD:
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{{#set: common name=Tubulin-tyrosine ligase/Tubulin polyglutamylase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05766 C05766]
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{{#set: ec number=EC-6.3.2.25}}
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* HMDB : HMDB02211
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{{#set: gene associated=Ec-05_000280|Ec-19_002060|Ec-19_003290|Ec-02_000600|Ec-26_006110|Ec-18_002200|Ec-03_004300|Ec-02_000590|Ec-02_006230|Ec-00_005910|Ec-20_004590|Ec-07_003840|Ec-02_002820|Ec-19_000160|Ec-14_002580|Ec-06_008800|Ec-01_007560|Ec-01_004520|Ec-18_003990}}
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{{#set: smiles=C(=O)([O-])CCC5(=C4(NC(CC1(NC(=C(CC([O-])=O)C(CCC(=O)[O-])=1)CC2(NC(=C(C(CCC(=O)[O-])=2)CC(=O)[O-])CC3(=C(CCC([O-])=O)C(CC(=O)[O-])=C(N3)C4))))=C(CC(=O)[O-])5))}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=QTTNOSKSLATGQB-UHFFFAOYSA-F}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=uroporphyrinogen-I}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: molecular weight=828.742    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=uroporphyrinogen I}}
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{{#set: produced by=RXN-14396}}
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{{#set: reversible reaction associated=RXN-10642}}
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Revision as of 13:51, 21 March 2018

Reaction 6.3.2.25-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tubulin-tyrosine ligase
    • Tubulin-tyrosine ligase/Tubulin polyglutamylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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