Difference between revisions of "Ec-20 000910"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate:thiamin diphosphat...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
+
** 6-phosphogluconate dehydrogenase, C-terminal-like
−
** Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
+
** 3-hydroxyacyl-CoA dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD-11519]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11520]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 pyruvate[c] '''+''' 1 H+[c] '''+''' 1 thiamine diphosphate[c] '''=>''' 1 CO2[c] '''+''' 1 2-(α-hydroxyethyl)thiamine diphosphate[c]
+
** 1 NAD+[c] '''+''' 1 OPC8-3-hydroxyacyl-CoA[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 OPC8-3-ketoacyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-18_003420]]
+
* Gene: [[Ec-19_005290]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-14_006530]]
−
* [[Ec-23_002710]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: GO-TERM
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-27_000530]]
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 +
** '''10''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00014 R00014]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)}}
+
{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
−
{{#set: common name=Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II}}
+
{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
−
{{#set: gene associated=Ec-18_003420|Ec-23_002710|Ec-27_000530}}
+
{{#set: ec number=EC-1.1.1.35}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: in pathway=PWY-735}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:51, 21 March 2018

Reaction RXN-10698

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 OPC8-3-hydroxyacyl-CoA[c] => 1 NADH[c] + 1 H+[c] + 1 OPC8-3-ketoacyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 10 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_000910&oldid=22295"