Difference between revisions of "RXN-9536"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate--CoA ligase (GDP-fo...")
(Created page with "Category:Gene == Gene Ec-02_005950 == * left end position: ** 6105780 * transcription direction: ** POSITIVE * right end position: ** 6129396 * centisome position: ** 93.5...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] ==
+
== Gene Ec-02_005950 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 6105780
−
* common name:
+
* transcription direction:
−
** Succinate--CoA ligase (GDP-forming), alpha subunit
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4]
+
** 6129396
 +
* centisome position:
 +
** 93.535164   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0082_0075
 +
** Esi0082_0075
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PROTEIN-KINASE-RXN]]
−
** 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c]
+
−
* With common name(s):
+
−
** 1 coenzyme A[c] '''+''' 1 GTP[c] '''+''' 1 itaconate[c] '''=>''' 1 itaconyl-CoA[c] '''+''' 1 GDP[c] '''+''' 1 phosphate[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-10_000030]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-5749]], itaconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=6105780}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=6129396}}
−
{{#set: common name=Succinate--CoA ligase (GDP-forming), alpha subunit}}
+
{{#set: centisome position=93.535164    }}
−
{{#set: ec number=EC-6.2.1.4}}
+
{{#set: common name=Esi_0082_0075|Esi0082_0075}}
−
{{#set: gene associated=Ec-10_000030}}
+
{{#set: reaction associated=PROTEIN-KINASE-RXN}}
−
{{#set: in pathway=PWY-5749}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:53, 21 March 2018

Gene Ec-02_005950

  • left end position:
    • 6105780
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6129396
  • centisome position:
    • 93.535164
  • Synonym(s):
    • Esi_0082_0075
    • Esi0082_0075

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-9536&oldid=22528"