Difference between revisions of "RXN-14390"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosy...")
(Created page with "Category:Gene == Gene Ec-05_003380 == * left end position: ** 5201035 * transcription direction: ** NEGATIVE * right end position: ** 5210090 * centisome position: ** 57.1...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] ==
+
== Gene Ec-05_003380 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 5201035
−
* common name:
+
* transcription direction:
−
** phosphoribosyl-ATP diphosphatase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/3.6.1.31 EC-3.6.1.31]
+
** 5210090
 +
* centisome position:
 +
** 57.132233   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0043_0035
 +
** Esi0043_0035
 +
** CAT
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[CATAL-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[PHOSPHORIBOSYL-ATP]][c] '''=>''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PPI]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H2O[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-ATP[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 2 H+[c] '''+''' 1 diphosphate[c]
+
* Reaction: [[PEROXID-RXN]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: go-term
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-14189]]
−
* [[Ec-19_001690]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: ec-number
−
***GO-TERM
+
* Reaction: [[RXN-14240]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
== Pathways  ==
+
*** Assignment: go-term
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* Reaction: [[RXN-15288]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** Source: [[annotation-esiliculosus_genome]]
−
== Reconstruction information  ==
+
*** Assignment: go-term
−
* Category: [[orthology]]
+
* Reaction: [[RXN-17352]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pantograph]]
+
*** Assignment: go-term
−
* Category: [[annotation]]
+
* Reaction: [[RXN-8635]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN66-1]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-7214]]
 +
* [[PWY-6824]]
 +
* [[PWY66-162]]
 +
* [[DETOX1-PWY]]
 +
* [[PWY-7445]]
 +
* [[DETOX1-PWY-1]]
 +
* [[PWY-5469]]
 +
* [[PWY-5506]]
 +
* [[PWY-5466]]
 +
* [[PWY-5461]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=5201035}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=5210090}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
+
{{#set: centisome position=57.132233    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0043_0035|Esi0043_0035|CAT}}
−
** [http://www.uniprot.org/uniprot/P44434 P44434]
+
{{#set: reaction associated=CATAL-RXN|PEROXID-RXN|RXN-14189|RXN-14240|RXN-15288|RXN-17352|RXN-8635|RXN66-1}}
−
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
+
{{#set: pathway associated=PWY-7214|PWY-6824|PWY66-162|DETOX1-PWY|PWY-7445|DETOX1-PWY-1|PWY-5469|PWY-5506|PWY-5466|PWY-5461}}
−
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
+
−
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
+
−
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
+
−
** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
+
−
** [http://www.uniprot.org/uniprot/O34912 O34912]
+
−
** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
+
−
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
+
−
** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
+
−
** [http://www.uniprot.org/uniprot/Q57750 Q57750]
+
−
** [http://www.uniprot.org/uniprot/O27344 O27344]
+
−
** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
+
−
** [http://www.uniprot.org/uniprot/O67780 O67780]
+
−
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
+
−
** [http://www.uniprot.org/uniprot/P26722 P26722]
+
−
** [http://www.uniprot.org/uniprot/P45353 P45353]
+
−
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
+
−
** [http://www.uniprot.org/uniprot/P50935 P50935]
+
−
** [http://www.uniprot.org/uniprot/P00815 P00815]
+
−
** [http://www.uniprot.org/uniprot/P07685 P07685]
+
−
** [http://www.uniprot.org/uniprot/O59667 O59667]
+
−
** [http://www.uniprot.org/uniprot/O82768 O82768]
+
−
** [http://www.uniprot.org/uniprot/P10367 P10367]
+
−
** [http://www.uniprot.org/uniprot/P06989 P06989]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=phosphoribosyl-ATP diphosphatase}}
+
−
{{#set: ec number=EC-3.6.1.31}}
+
−
{{#set: gene associated=Ec-19_001690}}
+
−
{{#set: in pathway=HISTSYN-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 14:54, 21 March 2018

Gene Ec-05_003380

  • left end position:
    • 5201035
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5210090
  • centisome position:
    • 57.132233
  • Synonym(s):
    • Esi_0043_0035
    • Esi0043_0035
    • CAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14390&oldid=22621"