Difference between revisions of "DIHYDROPTERIN-CH2OH-PP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17789 RXN-17789] == * direction: ** LEFT-TO-RIGHT * common name: ** enoyl-Coenzyme A hydratase/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17789 RXN-17789] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
 +
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
 +
** ClpP/crotonase-like domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.7 EC-2.7.4.7]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''=>''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[CPD-19162]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-19155]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine[c] '''=>''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 ADP[c]
+
** 1 (2E,9Z)-hexadecenoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxy-(9Z)-hexadecenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_006870]]
+
* Gene: [[Ec-16_001250]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_001380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_003560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6910]], hydroxymethylpyrimidine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6910 PWY-6910]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6890]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19893 19893]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04509 R04509]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JTE1 Q9JTE1]
 
−
** [http://www.uniprot.org/uniprot/Q9PNL2 Q9PNL2]
 
−
** [http://www.uniprot.org/uniprot/Q9CI79 Q9CI79]
 
−
** [http://www.uniprot.org/uniprot/Q9CG47 Q9CG47]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.7.4.7}}
+
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
−
{{#set: gene associated=Ec-06_006870}}
+
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
−
{{#set: in pathway=PWY-6910|PWY-7282|PWY-6890|PWY-7356|PWY-7357}}
+
{{#set: common name=ClpP/crotonase-like domain}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-4.2.1.17}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: gene associated=Ec-16_001250|Ec-06_001380|Ec-16_003560|Ec-14_006530}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:56, 21 March 2018

Reaction RXN-17789

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • ClpP/crotonase-like domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,9Z)-hexadecenoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxy-(9Z)-hexadecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=DIHYDROPTERIN-CH2OH-PP&oldid=22883"