Difference between revisions of "Ec-24 003550"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.46 EC-3.1.3.46]
+
** [http://enzyme.expasy.org/EC/2.7.4.7 EC-2.7.4.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-535]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 β-D-fructose 2,6-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 β-D-fructofuranose 6-phosphate[c] '''+''' 1 phosphate[c]
+
** 1 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-14_004360]]
+
* Gene: [[Ec-06_006870]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-423 PWY66-423]
+
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6890]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6910]], hydroxymethylpyrimidine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6910 PWY-6910]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17289 17289]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19893 19893]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00763 R00763]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04509 R04509]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P26285 P26285]
+
** [http://www.uniprot.org/uniprot/Q9JTE1 Q9JTE1]
−
** [http://www.uniprot.org/uniprot/P25114 P25114]
+
** [http://www.uniprot.org/uniprot/Q9PNL2 Q9PNL2]
−
** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]
+
** [http://www.uniprot.org/uniprot/Q9CI79 Q9CI79]
−
** [http://www.uniprot.org/uniprot/P49872 P49872]
+
** [http://www.uniprot.org/uniprot/Q9CG47 Q9CG47]
−
** [http://www.uniprot.org/uniprot/Q28830 Q28830]
+
−
** [http://www.uniprot.org/uniprot/Q91348 Q91348]
+
−
** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]
+
−
** [http://www.uniprot.org/uniprot/Q16875 Q16875]
+
−
** [http://www.uniprot.org/uniprot/P07953 P07953]
+
−
** [http://www.uniprot.org/uniprot/P16118 P16118]
+
−
** [http://www.uniprot.org/uniprot/P32604 P32604]
+
−
** [http://www.uniprot.org/uniprot/P70265 P70265]
+
−
** [http://www.uniprot.org/uniprot/P70266 P70266]
+
−
** [http://www.uniprot.org/uniprot/O24559 O24559]
+
−
** [http://www.uniprot.org/uniprot/O81398 O81398]
+
−
** [http://www.uniprot.org/uniprot/O64983 O64983]
+
−
** [http://www.uniprot.org/uniprot/Q9URZ7 Q9URZ7]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.1.3.46}}
+
{{#set: ec number=EC-2.7.4.7}}
−
{{#set: gene associated=Ec-14_004360}}
+
{{#set: gene associated=Ec-06_006870}}
−
{{#set: in pathway=PWY66-423}}
+
{{#set: in pathway=PWY-7282|PWY-6890|PWY-6910|PWY-7356|PWY-7357}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction source=orthology-aragem}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Revision as of 13:56, 21 March 2018

Reaction PYRIMSYN3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-6890, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis: PWY-6890
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6910, hydroxymethylpyrimidine salvage: PWY-6910
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7356, thiamine salvage IV (yeast): PWY-7356
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7357, thiamine formation from pyrithiamine and oxythiamine (yeast): PWY-7357
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_003550&oldid=22918"