Difference between revisions of "6.3.5.7-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16628 RXN-16628] == * direction: ** LEFT-TO-RIGHT * common name: ** Glucose/ribitol dehydrogena...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Carbon-nitr...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16628 RXN-16628] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glucose/ribitol dehydrogenase
+
** Carbon-nitrogen hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.9 EC-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/6.3.5.1 EC-6.3.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[2E-9Z-octadeca-2-9-dienoyl-ACPs]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[Oleoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
+
** 1 [[GLN]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a (2E,9Z)-octadeca-2,9-dienoyl-[acp][c] '''+''' 1 NADH[c] '''=>''' 1 an oleoyl-[acp][c] '''+''' 1 NAD+[c]
+
** 1 L-glutamine[c] '''+''' 1 nicotinate adenine dinucleotide[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 NAD+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-27_002470]]
+
* Gene: [[Ec-14_000810]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
+
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
−
** '''10''' reactions found over '''14''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7761]], NAD salvage pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24384 24384]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
 +
** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
 +
** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
 +
** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glucose/ribitol dehydrogenase}}
+
{{#set: common name=Carbon-nitrogen hydrolase}}
−
{{#set: ec number=EC-1.3.1.9}}
+
{{#set: ec number=EC-6.3.5.1}}
−
{{#set: gene associated=Ec-27_002470}}
+
{{#set: gene associated=Ec-14_000810}}
−
{{#set: in pathway=PWY-7664}}
+
{{#set: in pathway=PYRIDNUCSAL-PWY|PWY-5653|PYRIDNUCSYN-PWY|PWY-5381|PWY-7761}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:56, 21 March 2018

Reaction NAD-SYNTH-GLN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Carbon-nitrogen hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 nicotinate adenine dinucleotide[c] + 1 H2O[c] + 1 ATP[c] => 1 H+[c] + 1 NAD+[c] + 1 AMP[c] + 1 diphosphate[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PYRIDNUCSAL-PWY, NAD salvage pathway I: PYRIDNUCSAL-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: PWY-5653
    • 3 reactions found over 4 reactions in the full pathway
  • PYRIDNUCSYN-PWY, NAD biosynthesis I (from aspartate): PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5381, pyridine nucleotide cycling (plants): PWY-5381
    • 5 reactions found over 11 reactions in the full pathway
  • PWY-7761, NAD salvage pathway II: PWY-7761
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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