Difference between revisions of "2E-11Z-icosa-2-11-dienoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmethionin...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidate c...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** S-adenosylmethionine decarboxylase subgroup
+
** Phosphatidate cytidylyltransferase
−
** S-Adenosylmethionine decarboxylase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.50 EC-4.1.1.50]
+
** [http://enzyme.expasy.org/EC/2.7.7.41 EC-2.7.7.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CDPDIACYLGLYCEROL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 CO2[c]
+
** 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 CTP[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 a CDP-diacylglycerol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-22_002520]]
+
* Gene: [[Ec-16_001970]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-14_002980]]
−
* [[Ec-27_006890]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***EC-NUMBER
+
* Gene: [[Ec-17_000480]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-15_001900]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-05_001740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-14_003790]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
+
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
+
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834]
+
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16229 16229]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01799 R01799]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P82184 P82184]
+
** [http://www.uniprot.org/uniprot/Q9JX34 Q9JX34]
−
** [http://www.uniprot.org/uniprot/P21182 P21182]
+
** [http://www.uniprot.org/uniprot/Q9PMV2 Q9PMV2]
−
** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
+
** [http://www.uniprot.org/uniprot/Q59640 Q59640]
−
** [http://www.uniprot.org/uniprot/P17707 P17707]
+
** [http://www.uniprot.org/uniprot/P73548 P73548]
−
** [http://www.uniprot.org/uniprot/P28918 P28918]
+
** [http://www.uniprot.org/uniprot/P0ABG1 P0ABG1]
−
** [http://www.uniprot.org/uniprot/P17708 P17708]
+
** [http://www.uniprot.org/uniprot/O04940 O04940]
−
** [http://www.uniprot.org/uniprot/P50243 P50243]
+
** [http://www.uniprot.org/uniprot/Q49433 Q49433]
−
** [http://www.uniprot.org/uniprot/P46255 P46255]
+
−
** [http://www.uniprot.org/uniprot/Q04694 Q04694]
+
−
** [http://www.uniprot.org/uniprot/Q42679 Q42679]
+
−
** [http://www.uniprot.org/uniprot/Q42829 Q42829]
+
−
** [http://www.uniprot.org/uniprot/P79888 P79888]
+
−
** [http://www.uniprot.org/uniprot/O04009 O04009]
+
−
** [http://www.uniprot.org/uniprot/O24575 O24575]
+
−
** [http://www.uniprot.org/uniprot/Q43820 Q43820]
+
−
** [http://www.uniprot.org/uniprot/Q39676 Q39676]
+
−
** [http://www.uniprot.org/uniprot/Q39677 Q39677]
+
−
** [http://www.uniprot.org/uniprot/O49972 O49972]
+
−
** [http://www.uniprot.org/uniprot/O65354 O65354]
+
−
** [http://www.uniprot.org/uniprot/O02655 O02655]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=S-adenosylmethionine decarboxylase subgroup}}
+
{{#set: common name=Phosphatidate cytidylyltransferase}}
−
{{#set: common name=S-Adenosylmethionine decarboxylase}}
+
{{#set: ec number=EC-2.7.7.41}}
−
{{#set: ec number=EC-4.1.1.50}}
+
{{#set: gene associated=Ec-16_001970|Ec-14_002980|Ec-17_000480|Ec-15_001900|Ec-05_001740|Ec-14_003790}}
−
{{#set: gene associated=Ec-22_002520|Ec-27_006890}}
+
{{#set: in pathway=PWY-5667|PWY0-1319|PWY-5981}}
−
{{#set: in pathway=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:56, 21 March 2018

Reaction CDPDIGLYSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphatidate cytidylyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] + 1 CTP[c] + 1 H+[c] => 1 diphosphate[c] + 1 a CDP-diacylglycerol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5667, CDP-diacylglycerol biosynthesis I: PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1319, CDP-diacylglycerol biosynthesis II: PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5981, CDP-diacylglycerol biosynthesis III: PWY-5981
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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