Difference between revisions of "Ec-00 002530"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPREDUCT-RXN GDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7810 RXN-7810] == * direction: ** LEFT-TO-RIGHT * common name: ** Prenyltransferase/squalene ox...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPREDUCT-RXN GDPREDUCT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7810 RXN-7810] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Ribonucleoside-diphosphate reductase small chain
+
** Prenyltransferase/squalene oxidase
−
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
+
−
** EsV-1-128
+
−
** EsV-1-180
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
+
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[DGDP]][c]
+
** 1 [[CPD-4211]][c] '''+''' 1 [[CPD-7109]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-7105]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a reduced thioredoxin[c] '''+''' 1 GDP[c] '''=>''' 1 an oxidized thioredoxin[c] '''+''' 1 H2O[c] '''+''' 1 dGDP[c]
+
** 1 dimethylallyl diphosphate[c] '''+''' 1 4-prenylphlorisovalerophenone[c] '''=>''' 1 diphosphate[c] '''+''' 1 diprenylphlorisovalerophenone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-17_003700]]
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* Gene: [[Ec-07_006170]]
−
** [[pantograph]]-[[aragem]]
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** Source: [[annotation-esiliculosus_genome]]
−
* [[Ec-19_000440]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** ESILICULOSUS_GENOME
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−
***EC-NUMBER
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−
** [[pantograph]]-[[aragem]]
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−
* [[Ec-06_005570]]
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−
** ESILICULOSUS_GENOME
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−
***EC-NUMBER
+
−
* [[Ec-06_005120]]
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−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-11_002180]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-11_002170]]
+
−
** ESILICULOSUS_GENOME
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−
***GO-TERM
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−
* [[Ec-21_002920]]
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−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222]
+
* [[PWY-5132]], humulone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5132 PWY-5132]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28030 28030]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02019 R02019]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
+
{{#set: common name=Prenyltransferase/squalene oxidase}}
−
{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
+
{{#set: ec number=EC-2.5.1}}
−
{{#set: common name=EsV-1-128}}
+
{{#set: gene associated=Ec-07_006170}}
−
{{#set: common name=EsV-1-180}}
+
{{#set: in pathway=PWY-5132}}
−
{{#set: ec number=EC-1.17.4.1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: gene associated=Ec-17_003700|Ec-19_000440|Ec-06_005570|Ec-06_005120|Ec-11_002180|Ec-11_002170|Ec-21_002920}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: in pathway=PWY-7222|PWY-7226}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:57, 21 March 2018

Reaction RXN-7810

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Prenyltransferase/squalene oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dimethylallyl diphosphate[c] + 1 4-prenylphlorisovalerophenone[c] => 1 diphosphate[c] + 1 diprenylphlorisovalerophenone[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5132, humulone biosynthesis: PWY-5132
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_002530&oldid=23025"