Difference between revisions of "DNA-Adjacent-Pyrimidines"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.19.3-RXN 1.14.19.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytochrome b5-like...")
(Created page with "Category:Gene == Gene Ec-03_004860 == * left end position: ** 5777504 * transcription direction: ** POSITIVE * right end position: ** 5791703 * centisome position: ** 88.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.19.3-RXN 1.14.19.3-RXN] ==
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== Gene Ec-03_004860 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5777504
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* common name:
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* transcription direction:
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** Cytochrome b5-like heme/steroid binding domain
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.14.19.3 EC-1.14.19.3]
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** 5791703
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* centisome position:
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** 88.49448   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0050_0076
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** Esi0050_0076
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[CPD-18]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[GAMMA-LINOLENOYL-COA]][c] '''+''' 2 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 linoleoyl-CoA[c] '''+''' 1 oxygen[c] '''+''' 2 H+[c] '''+''' 2 a ferrocytochrome b5[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 γ-linolenoyl-CoA[c] '''+''' 2 H2O[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Ec-24_002300]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6000]], γ-linolenate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6000 PWY-6000]
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*** Assignment: go-term
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* Reaction: [[RXN0-5462]]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7184]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5777504}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22196 22196]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5791703}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03814 R03814]
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{{#set: centisome position=88.49448    }}
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* UNIPROT:
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{{#set: common name=Esi_0050_0076|Esi0050_0076}}
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** [http://www.uniprot.org/uniprot/Q9HDG8 Q9HDG8]
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/Q54795 Q54795]
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
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** [http://www.uniprot.org/uniprot/O95864 O95864]
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** [http://www.uniprot.org/uniprot/O61388 O61388]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Cytochrome b5-like heme/steroid binding domain}}
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{{#set: ec number=EC-1.14.19.3}}
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{{#set: gene associated=Ec-24_002300}}
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{{#set: in pathway=PWY-6000}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:57, 21 March 2018

Gene Ec-03_004860

  • left end position:
    • 5777504
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5791703
  • centisome position:
    • 88.49448
  • Synonym(s):
    • Esi_0050_0076
    • Esi0050_0076

Reactions associated

Pathways associated

External links

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