Difference between revisions of "CPD-17346"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-METHYL-THF-GLU-N 5-METHYL-THF-GLU-N] == * common name: ** an N5-methyl-tetrahydrofolate * Syn...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-METHYL-THF-GLU-N 5-METHYL-THF-GLU-N] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** an N5-methyl-tetrahydrofolate
+
** 6-phosphogluconate dehydrogenase, C-terminal-like
 +
** 3-hydroxyacyl-CoA dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[2.1.1.19-RXN]]
+
* With identifiers:
−
* [[HOMOCYSMETB12-RXN]]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[K-HEXANOYL-COA]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[OH-HEXANOYL-COA]][c]
−
== Reaction(s) known to produce the compound ==
+
* With common name(s):
−
* [[1.5.1.20-RXN]]
+
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxohexanoyl-CoA[c] '''=>''' 1 NAD+[c] '''+''' 1 (S)-3-hydroxyhexanoyl-CoA[c]
−
* [[RXN-5061]]
+
 
−
== Reaction(s) of unknown directionality ==
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_005290]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=an N5-methyl-tetrahydrofolate}}
+
* RHEA:
−
{{#set: consumed by=2.1.1.19-RXN|HOMOCYSMETB12-RXN}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31144 31144]
−
{{#set: produced by=1.5.1.20-RXN|RXN-5061}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04748 R04748]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
 +
{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
 +
{{#set: ec number=EC-1.1.1.35}}
 +
{{#set: gene associated=Ec-14_006530|Ec-19_005290}}
 +
{{#set: in pathway=PWY-6863}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:57, 21 March 2018

Reaction RXN-12570

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADH[c] + 1 3-oxohexanoyl-CoA[c] => 1 NAD+[c] + 1 (S)-3-hydroxyhexanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-17346&oldid=23143"