Difference between revisions of "TRNA-uridine-38-40"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7005 CPD-7005] == * smiles: ** C=CC2(=C(C)C5(=CC1(C(C)C(CCC(=O)OCC=C(C)CCC=C(C)CCC=C(C)CCC=...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.2.17-RXN 3.5.2.17-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7005 CPD-7005] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.2.17-RXN 3.5.2.17-RXN] ==
−
* smiles:
+
* direction:
−
** C=CC2(=C(C)C5(=CC1(C(C)C(CCC(=O)OCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C)C(N=1)=C7([C-](C(OC)=O)C(=O)C6(C(C)=C4(N([Mg]N(C2=CC3(C(C)=C(CC)C(N=3)=C4))5)C=67))))))
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=QBLSEPRESQJTCI-ZNLWZYPOSA-M
+
** [http://enzyme.expasy.org/EC/3.5.2.17 EC-3.5.2.17]
−
* common name:
+
−
** geranylgeranyl chlorophyll a
+
−
* molecular weight:
+
−
** 886.447   
+
 
* Synonym(s):
 
* Synonym(s):
−
** geranylgeranyl-chl a
 
−
** GG-chl a
 
−
** GG-chlorophyll a
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-7664]]
+
* With identifiers:
−
* [[RXN-17428]]
+
** 1 [[WATER]][c] '''+''' 1 [[5-HYDROXYISOURATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-5821]][c]
−
== Reaction(s) known to produce the compound ==
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 H2O[c] '''+''' 1 5-hydroxyisourate[c] '''=>''' 1 H+[c] '''+''' 1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
== Pathways  ==
 +
* [[PWY-7394]], urate degradation to allantoin II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7394 PWY-7394]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5691]], urate degradation to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657538 90657538]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23736 23736]
−
* CHEBI:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=64668 64668]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06601 R06601]
−
{{#set: smiles=C=CC2(=C(C)C5(=CC1(C(C)C(CCC(=O)OCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C)C(N=1)=C7([C-](C(OC)=O)C(=O)C6(C(C)=C4(N([Mg]N(C2=CC3(C(C)=C(CC)C(N=3)=C4))5)C=67))))))}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: inchi key=InChIKey=QBLSEPRESQJTCI-ZNLWZYPOSA-M}}
+
{{#set: ec number=EC-3.5.2.17}}
−
{{#set: common name=geranylgeranyl chlorophyll a}}
+
{{#set: in pathway=PWY-7394|PWY-5691}}
−
{{#set: molecular weight=886.447    }}
+
{{#set: reconstruction category=annotation}}
−
{{#set: common name=geranylgeranyl-chl a|GG-chl a|GG-chlorophyll a}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: consumed by=RXN-7664|RXN-17428}}
+
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:58, 21 March 2018

Reaction 3.5.2.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 5-hydroxyisourate[c] => 1 H+[c] + 1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline[c]

Genes associated with this reaction

Pathways

  • PWY-7394, urate degradation to allantoin II: PWY-7394
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5691, urate degradation to allantoin I: PWY-5691
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=TRNA-uridine-38-40&oldid=23174"