Difference between revisions of "PWY-7210"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNPOXI-RXN PNPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine-phosphate ox...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNPOXI-RXN PNPOXI-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
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** pyridoxamine-phosphate oxidase
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** pyrimidine deoxyribonucleotides biosynthesis from CTP
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* ec number:
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** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''8''' reactions in the full pathway
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** 1 [[PYRIDOXINE-5P]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
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* [[CDPREDUCT-RXN]]
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* With common name(s):
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** 7 associated gene(s):
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** 1 pyridoxine 5'-phosphate[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 pyridoxal 5'-phosphate[c]
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*** [[Ec-19_000440]]
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*** [[Ec-06_005120]]
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== Genes associated with this reaction  ==
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*** [[Ec-06_005570]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-21_002920]]
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* [[Ec-01_000340]]
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*** [[Ec-17_003700]]
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** ESILICULOSUS_GENOME
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*** [[Ec-11_002170]]
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***GO-TERM
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*** [[Ec-11_002180]]
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* [[Ec-10_006030]]
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** 2 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** [[orthology-aragem]]
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* [[Ec-09_002030]]
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* [[DCDPKIN-RXN]]
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** ESILICULOSUS_GENOME
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** 7 associated gene(s):
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***GO-TERM
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*** [[Ec-03_001380]]
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== Pathways  ==
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*** [[Ec-11_005170]]
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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*** [[Ec-26_003930]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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*** [[Ec-22_003280]]
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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*** [[Ec-07_000140]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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*** [[Ec-04_001140]]
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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*** [[Ec-11_004330]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
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*** [[annotation-esiliculosus_genome]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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* [[DCMP-DEAMINASE-RXN]]
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* [[annotation]]:
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** 1 associated gene(s):
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** [[pathwaytools]]:
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*** [[Ec-12_003010]]
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*** [[esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[DTDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-26_003930]]
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*** [[Ec-07_000140]]
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*** [[Ec-03_001380]]
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*** [[Ec-22_003280]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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*** [[Ec-11_005170]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
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*** [[Ec-20_004950]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-12195]]
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** 9 associated gene(s):
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*** [[Ec-05_005340]]
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*** [[Ec-03_004860]]
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*** [[Ec-02_005730]]
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*** [[Ec-17_000870]]
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*** [[Ec-18_004660]]
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*** [[Ec-28_000420]]
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*** [[Ec-03_001180]]
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*** [[Ec-01_003690]]
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*** [[Ec-06_005470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14187]]
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** 1 associated gene(s):
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*** [[Ec-02_001970]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[THYMIDYLATESYN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-27_004630]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15149 15149]
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{{#set: taxonomic range=TAX-33208}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00278 R00278]
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{{#set: taxonomic range=TAX-201174}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyrimidine deoxyribonucleotides biosynthesis from CTP}}
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{{#set: common name=pyridoxamine-phosphate oxidase}}
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{{#set: reaction found=8}}
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{{#set: ec number=EC-1.4.3.5}}
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{{#set: total reaction=8}}
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{{#set: gene associated=Ec-01_000340|Ec-10_006030|Ec-09_002030}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY|PYRIDOXSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:00, 21 March 2018

Pathway PWY-7210

Reaction(s) found

8 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7210&oldid=23725"