Difference between revisions of "PNPOXI-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNPOXI-RXN PNPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine-phosphate ox...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNPOXI-RXN PNPOXI-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** sucrose degradation V (sucrose α-glucosidase)
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** pyridoxamine-phosphate oxidase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[RXN-8631]]
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** 1 [[PYRIDOXINE-5P]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-10_004980]]
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** 1 pyridoxine 5'-phosphate[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 pyridoxal 5'-phosphate[c]
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*** [[Ec-10_000880]]
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*** [[Ec-14_001680]]
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== Genes associated with this reaction  ==
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*** [[Ec-01_008040]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-01_000340]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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*** Assignment: GO-TERM
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** 4 associated gene(s):
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* Gene: [[Ec-09_002030]]
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*** [[Ec-08_000500]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-24_000360]]
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*** Assignment: GO-TERM
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*** [[Ec-03_002790]]
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* Gene: [[Ec-10_006030]]
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*** [[Ec-23_004160]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Assignment: GO-TERM
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** [[orthology-aragem]]
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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== Reaction(s) not found ==
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.48-RXN 3.2.1.48-RXN]
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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* [http://metacyc.org/META/NEW-IMAGE?object=KETOHEXOKINASE-RXN KETOHEXOKINASE-RXN]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=TRIOKINASE-RXN TRIOKINASE-RXN]
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-40674}}
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* RHEA:
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{{#set: common name=sucrose degradation V (sucrose α-glucosidase)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15149 15149]
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{{#set: reaction found=2}}
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* LIGAND-RXN:
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{{#set: total reaction=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00278 R00278]
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{{#set: completion rate=40.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyridoxamine-phosphate oxidase}}
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{{#set: ec number=EC-1.4.3.5}}
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{{#set: gene associated=Ec-01_000340|Ec-09_002030|Ec-10_006030}}
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{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY|PYRIDOXSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:00, 21 March 2018

Reaction PNPOXI-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyridoxamine-phosphate oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 5 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I: PYRIDOXSYN-PWY
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PNPOXI-RXN&oldid=23726"