Difference between revisions of "Ec-04 003260"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12575 RXN-12575] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans retinyl-ester hyd...")
(Created page with "Category:Gene == Gene Ec-04_003260 == * left end position: ** 3316561 * transcription direction: ** NEGATIVE * right end position: ** 3319414 * centisome position: ** 50.9...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12575 RXN-12575] ==
+
== Gene Ec-04_003260 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3316561
−
* common name:
+
* transcription direction:
−
** all-trans retinyl-ester hydrolase
+
** NEGATIVE
−
** Phospholipase/carboxylesterase/thioesterase
+
* right end position:
−
** carboxylic ester hydrolase
+
** 3319414
−
** Carboxylesterase, type B
+
* centisome position:
−
** putative serine esterase
+
** 50.931156   
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0080_0100
 +
** Esi0080_0100
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[INORGPYROPHOSPHAT-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[All-trans-Retinyl-Esters]][c] '''=>''' 1 [[CPD-13524]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Long-Chain-Fatty-Acids]][c]
+
−
* With common name(s):
+
−
** 1 H2O[c] '''+''' 1 an all-trans-retinyl ester[c] '''=>''' 1 all-trans-retinol[c] '''+''' 1 H+[c] '''+''' 1 a long-chain fatty acid[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-16_002070]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-25_000250]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-19_001900]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-12_006850]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-27_004830]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY-6857]], retinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3316561}}
−
{{#set: common name=all-trans retinyl-ester hydrolase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=Phospholipase/carboxylesterase/thioesterase}}
+
{{#set: right end position=3319414}}
−
{{#set: common name=carboxylic ester hydrolase}}
+
{{#set: centisome position=50.931156    }}
−
{{#set: common name=Carboxylesterase, type B}}
+
{{#set: common name=Esi_0080_0100|Esi0080_0100}}
−
{{#set: common name=putative serine esterase}}
+
{{#set: reaction associated=INORGPYROPHOSPHAT-RXN}}
−
{{#set: ec number=EC-3.1.1.1}}
+
−
{{#set: gene associated=Ec-16_002070|Ec-25_000250|Ec-19_001900|Ec-12_006850|Ec-27_004830}}
+
−
{{#set: in pathway=PWY-6857}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:00, 21 March 2018

Gene Ec-04_003260

  • left end position:
    • 3316561
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3319414
  • centisome position:
    • 50.931156
  • Synonym(s):
    • Esi_0080_0100
    • Esi0080_0100

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-04_003260&oldid=23744"